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Effect of RNA silencing suppression activity of chrysanthemum virus B p12 protein on small RNA species

Ramesh, Vetukuri and Kalyandurg, Pruthvi Balachandra and Saripella, Ganapathi Varma and Sen, Diya and Gil, José Fernando and Lukhovitskaya, Nina and Grenville-Briggs Didymus, Laura and Savenkov, Eugene (2020). Effect of RNA silencing suppression activity of chrysanthemum virus B p12 protein on small RNA species. Archives of Virology. 165 , 2953-2959
[Journal article]

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Abstract

Chrysanthemum virus B encodes a multifunctional p12 protein that acts as a transcriptional activator in the nucleus and as a suppressor of RNA silencing in the cytoplasm. Here, we investigated the impact of p12 on accumulation of major classes of small RNAs (sRNAs). The results show dramatic changes in the sRNA profiles characterised by an overall reduction in sRNA accumulation, changes in the pattern of size distribution of canonical siRNAs and in the ratio between sense and antisense strands, lower abundance of siRNAs with a U residue at the 5 '-terminus, and changes in the expression of certain miRNAs, most of which were downregulated.

Authors/Creators:Ramesh, Vetukuri and Kalyandurg, Pruthvi Balachandra and Saripella, Ganapathi Varma and Sen, Diya and Gil, José Fernando and Lukhovitskaya, Nina and Grenville-Briggs Didymus, Laura and Savenkov, Eugene
Title:Effect of RNA silencing suppression activity of chrysanthemum virus B p12 protein on small RNA species
Year of publishing :2020
Volume:165
Page range:2953-2959
Number of Pages:7
Publisher:SPRINGER WIEN
ISSN:0304-8608
Language:English
Publication Type:Journal article
Article category:Scientific peer reviewed
Version:Published version
Copyright:Creative Commons: Attribution 4.0
Full Text Status:Public
Subjects:(A) Swedish standard research categories 2011 > 1 Natural sciences > 106 Biological Sciences (Medical to be 3 and Agricultural to be 4) > Microbiology (Microbiology in the medical area to be 30109)
URN:NBN:urn:nbn:se:slu:epsilon-p-108415
Permanent URL:
http://urn.kb.se/resolve?urn=urn:nbn:se:slu:epsilon-p-108415
Additional ID:
Type of IDID
DOI10.1007/s00705-020-04832-y
Web of Science (WoS)000578578600004
ID Code:18087
Faculty:LTV - Fakulteten för landskapsarkitektur, trädgårds- och växtproduktionsvetenskap
NJ - Fakulteten för naturresurser och jordbruksvetenskap
Department:(LTJ, LTV) > Department of Plant Breeding (from 130101)
(NL, NJ) > Dept. of Plant Biology and Forest Genetics (until 131231)
(LTJ, LTV) > Department of Plant Protection Biology
Deposited By: SLUpub Connector
Deposited On:05 Nov 2020 11:23
Metadata Last Modified:05 Nov 2020 11:31

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