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COSORE: A community database for continuous soil respiration and other soil-atmosphere greenhouse gas flux data

Bond-Lamberty, Ben and Christianson, Danielle S. and Malhotra, Avni and Pennington, Stephanie C. and Sihi, Debjani and AghaKouchak, Amir and Anjileli, Hassan and Arain, M. Altaf and Armesto, Juan J. and Ashraf, Samaneh and Ataka, Mioko and Baldocchi, Dennis and Black, Thomas Andrew and Buchmann, Nina and Carbone, Mariah S. and Chang, Shih-Chieh and Crill, Patrick and Curtis, Peter S. and Davidson, Eric A. and Desai, Ankur R. and Drake, John E. and El-Madany, Tarek S. and Gavazzi, Michael and Gorres, Carolyn-Monika and Gough, Christopher M. and Goulden, Michael and Gregg, Jillian and del Arroyo, Omar Gutierrez and He, Jin-Sheng and Hirano, Takashi and Hopple, Anya and Hughes, Holly and Järveoja, Järvi and Jassal, Rachhpal and Jian, Jinshi and Kan, Haiming and Kaye, Jason and Kominami, Yuji and Liang, Naishen and Lipson, David and Macdonald, Catriona A. and Maseyk, Kadmiel and Mathes, Kayla and Mauritz, Marguerite and Mayes, Melanie A. and McNulty, Steve and Miao, Guofang and Migliavacca, Mirco and Miller, Scott and Miniat, Chelcy F. and Nietz, Jennifer G. and Nilsson, Mats and Noormets, Asko and Norouzi, Hamidreza and O'Connell, Christine S. and Osborne, Bruce and Oyonarte, Cecilio and Pang, Zhuo and Peichl, Matthias and Pendall, Elise and Perez-Quezada, Jorge F. and Phillips, Claire L. and Raich, James W. and Renchon, Alexandre A. and Ruehr, Nadine K. and Sanchez-Canete, Enrique P. and Saunders, Matthew and Savage, Kathleen E. and Schrumpf, Marion and Scott, Russell L. and Seibt, Ulli and Silver, Whendee L. and Sun, Wu and Szutu, Daphne and Takagi, Kentaro and Teramoto, Munemasa and Tjoelker, Mark G. and Trumbore, Susan and Ueyama, Masahito and Vargas, Rodrigo and Varner, Ruth K. and Verfaillie, Joseph and Vogel, Christoph and Wang, Jinsong and Winston, Greg and Wood, Tana E. and Wu, Juying and Wutzler, Thomas and Zeng, Jiye and Zha, Tianshan and Zhang, Quan and Zou, Junliang (2020). COSORE: A community database for continuous soil respiration and other soil-atmosphere greenhouse gas flux data. Global Change Biology. 26 , 7268-7283
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Abstract

Globally, soils store two to three times as much carbon as currently resides in the atmosphere, and it is critical to understand how soil greenhouse gas (GHG) emissions and uptake will respond to ongoing climate change. In particular, the soil-to-atmosphere CO(2)flux, commonly though imprecisely termed soil respiration (R-S), is one of the largest carbon fluxes in the Earth system. An increasing number of high-frequencyR(S)measurements (typically, from an automated system with hourly sampling) have been made over the last two decades; an increasing number of methane measurements are being made with such systems as well. Such high frequency data are an invaluable resource for understanding GHG fluxes, but lack a central database or repository. Here we describe the lightweight, open-source COSORE (COntinuous SOil REspiration) database and software, that focuses on automated, continuous and long-term GHG flux datasets, and is intended to serve as a community resource for earth sciences, climate change syntheses and model evaluation. Contributed datasets are mapped to a single, consistent standard, with metadata on contributors, geographic location, measurement conditions and ancillary data. The design emphasizes the importance of reproducibility, scientific transparency and open access to data. While being oriented towards continuously measuredR(S), the database design accommodates other soil-atmosphere measurements (e.g. ecosystem respiration, chamber-measured net ecosystem exchange, methane fluxes) as well as experimental treatments (heterotrophic only, etc.). We give brief examples of the types of analyses possible using this new community resource and describe its accompanying R software package.

Authors/Creators:Bond-Lamberty, Ben and Christianson, Danielle S. and Malhotra, Avni and Pennington, Stephanie C. and Sihi, Debjani and AghaKouchak, Amir and Anjileli, Hassan and Arain, M. Altaf and Armesto, Juan J. and Ashraf, Samaneh and Ataka, Mioko and Baldocchi, Dennis and Black, Thomas Andrew and Buchmann, Nina and Carbone, Mariah S. and Chang, Shih-Chieh and Crill, Patrick and Curtis, Peter S. and Davidson, Eric A. and Desai, Ankur R. and Drake, John E. and El-Madany, Tarek S. and Gavazzi, Michael and Gorres, Carolyn-Monika and Gough, Christopher M. and Goulden, Michael and Gregg, Jillian and del Arroyo, Omar Gutierrez and He, Jin-Sheng and Hirano, Takashi and Hopple, Anya and Hughes, Holly and Järveoja, Järvi and Jassal, Rachhpal and Jian, Jinshi and Kan, Haiming and Kaye, Jason and Kominami, Yuji and Liang, Naishen and Lipson, David and Macdonald, Catriona A. and Maseyk, Kadmiel and Mathes, Kayla and Mauritz, Marguerite and Mayes, Melanie A. and McNulty, Steve and Miao, Guofang and Migliavacca, Mirco and Miller, Scott and Miniat, Chelcy F. and Nietz, Jennifer G. and Nilsson, Mats and Noormets, Asko and Norouzi, Hamidreza and O'Connell, Christine S. and Osborne, Bruce and Oyonarte, Cecilio and Pang, Zhuo and Peichl, Matthias and Pendall, Elise and Perez-Quezada, Jorge F. and Phillips, Claire L. and Raich, James W. and Renchon, Alexandre A. and Ruehr, Nadine K. and Sanchez-Canete, Enrique P. and Saunders, Matthew and Savage, Kathleen E. and Schrumpf, Marion and Scott, Russell L. and Seibt, Ulli and Silver, Whendee L. and Sun, Wu and Szutu, Daphne and Takagi, Kentaro and Teramoto, Munemasa and Tjoelker, Mark G. and Trumbore, Susan and Ueyama, Masahito and Vargas, Rodrigo and Varner, Ruth K. and Verfaillie, Joseph and Vogel, Christoph and Wang, Jinsong and Winston, Greg and Wood, Tana E. and Wu, Juying and Wutzler, Thomas and Zeng, Jiye and Zha, Tianshan and Zhang, Quan and Zou, Junliang
Title:COSORE: A community database for continuous soil respiration and other soil-atmosphere greenhouse gas flux data
Series Name/Journal:Global Change Biology
Year of publishing :2020
Volume:26
Page range:7268-7283
Number of Pages:16
Publisher:WILEY
ISSN:1354-1013
Language:English
Publication Type:Journal article
Article category:Scientific peer reviewed
Version:Published version
Copyright:Creative Commons: Attribution 4.0
Full Text Status:Public
Subjects:(A) Swedish standard research categories 2011 > 1 Natural sciences > 105 Earth and Related Environmental Sciences > Climate Research
Keywords:carbon dioxide, greenhouse gases, methane, open data, open science, soil respiration
URN:NBN:urn:nbn:se:slu:epsilon-p-108251
Permanent URL:
http://urn.kb.se/resolve?urn=urn:nbn:se:slu:epsilon-p-108251
Additional ID:
Type of IDID
DOI10.1111/gcb.15353
Web of Science (WoS)000575527200001
ID Code:21735
Faculty:S - Faculty of Forest Sciences
Department:(S) > Dept. of Forest Ecology and Management
Deposited By: SLUpub Connector
Deposited On:26 Jan 2021 08:00
Metadata Last Modified:26 Jan 2021 08:01

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