Nybom, Hilde and Lācis, Gunārs
(2021).
Recent Large-Scale Genotyping and Phenotyping of Plant Genetic Resources of Vegetatively Propagated Crops.
Plants. 10
, 415
[Article Review/Survey]
![]() |
PDF
461kB |
Abstract
Several recent national and international projects have focused on large-scale genotyping of plant genetic resources in vegetatively propagated crops like fruit and berries, potatoes and woody ornamentals. The primary goal is usually to identify true-to-type plant material, detect possible synonyms, and investigate genetic diversity and relatedness among accessions. A secondary goal may be to create sustainable databases that can be utilized in research and breeding for several years ahead. Commonly applied DNA markers (like microsatellite DNA and SNPs) and next-generation sequencing each have their pros and cons for these purposes. Methods for large-scale phenotyping have lagged behind, which is unfortunate since many commercially important traits (yield, growth habit, storability, and disease resistance) are difficult to score. Nevertheless, the analysis of gene action and development of robust DNA markers depends on environmentally controlled screening of very large sets of plant material. Although more time-consuming, co-operative projects with broad-scale data collection are likely to produce more reliable results. In this review, we will describe some of the approaches taken in genotyping and/or phenotyping projects concerning a wide variety of vegetatively propagated crops.
Authors/Creators: | Nybom, Hilde and Lācis, Gunārs | ||||||
---|---|---|---|---|---|---|---|
Title: | Recent Large-Scale Genotyping and Phenotyping of Plant Genetic Resources of Vegetatively Propagated Crops | ||||||
Series Name/Journal: | Plants | ||||||
Year of publishing : | 2021 | ||||||
Volume: | 10 | ||||||
Article number: | 415 | ||||||
Number of Pages: | 30 | ||||||
Publisher: | MDPI | ||||||
Associated Programs and Other Stakeholders: | Z - SLU - Libray > Odla mera | ||||||
Language: | English | ||||||
Publication Type: | Article Review/Survey | ||||||
Article category: | Scientific peer reviewed | ||||||
Version: | Published version | ||||||
Copyright: | Creative Commons: Attribution 4.0 | ||||||
Full Text Status: | Public | ||||||
Subjects: | (A) Swedish standard research categories 2011 > 4 Agricultural Sciences > 401 Agricultural, Forestry and Fisheries > Agricultural Science | ||||||
Keywords: | DNA marker, genetic diversity, GWAS, pedigree, plant breeding, SNP, SSR | ||||||
URN:NBN: | urn:nbn:se:slu:epsilon-p-111259 | ||||||
Permanent URL: | http://urn.kb.se/resolve?urn=urn:nbn:se:slu:epsilon-p-111259 | ||||||
Additional ID: |
| ||||||
ID Code: | 22864 | ||||||
Deposited By: | SLUpub Connector | ||||||
Deposited On: | 01 Apr 2021 06:43 | ||||||
Metadata Last Modified: | 02 Apr 2021 04:02 |
Repository Staff Only: item control page