Open access publications in the SLU publication database

A

Abarenkov, Kessy and Kristiansson, Erik and Ryberg, Martin and Nogal-Prata, Sandra and Kristiansson, Erik and Gomez-Martinez, Daniela and Stueer-Patowsky, Katrin and Jansson, Tobias and Polme, Sergei and Corcoll, Natalia and Scharn, Ruud and Sanchez-Garcia, Marisol and Wurzbacher, Christian and Khomich, Maryia and Nilsson, R. Henrik (2022). The curse of the uncultured fungus. MycoKeys :86 , 177-194
[Research article]

Abd El-Daim, Islam Ahmed Moustafa (2015). Use of rhizobacteria for the alleviation of plant stress. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:48
ISBN 978-91-576-8294-9
eISBN 978-91-576-8295-6
[Doctoral thesis]

Adamo, Irene and Castaño Soler, Carles and Antonio Bonet, Jose and Colinas, Carlos and Martínez de Aragón, Juan and Alday, Josu G. (2021). Lack of Phylogenetic Differences in Ectomycorrhizal Fungi among Distinct Mediterranean Pine Forest Habitats. Journal of Fungi. 7 , 793
[Research article]

Adomas, Aleksandra (2007). Transcript profiling of the Heterobasidion-conifer pathosystem. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2007:35
ISBN 978-91-576-7334-3
[Doctoral thesis]

Ahonen-Jonnarth, Ulla (2000). Growth, nutrient uptake and ectomycorrhizal function in Pinus sylvestris plants exposed to aluminium and heavy metals. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae. Silvestria, 1401-6230
ISBN 91-576-5864-1
[Doctoral thesis]

Alström, Sadhna (2004). Biologisk bekämpning av sjukdomar i jordbruksgrödor. Uppsala: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. Faktablad om växtskydd. Jordbruk ; 119 J
[Factsheet]

Andersson, Björn (2007). Sexual reproduction in Phytophthora infestans. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2007:77
ISBN 978-91-576-7376-3
[Doctoral thesis]

Andersson, Björn and Djurle, Annika and Orum, Jens Erik and Jalli, Marja and Ronis, Antanas and Ficke, Andrea and Jorgensen, Lise Nistrup (2022). Comparison of models for leaf blotch disease management in wheat based on historical yield and weather data in the Nordic-Baltic region. Agronomy for Sustainable Development. 42 :3 , 42
[Research article]

Andersson, Björn and Pettersson, Maj-Lis and Olofsson, Börje (2006). Bladmögel och brunröta på potatis. (NL, NJ) > Dept. of Entomology (until 061231)
(NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. Faktablad om växtskydd. Trädgård ; 40 T
[Factsheet]

Andersson, Mattias and Brandrud, Tor Erik and Dahlberg, Anders (2019). Svampresa till västra Sibirien - XV international workshop on the study of macromycetes, Tomsk 19-26 augusti 2018. Svensk mykologisk tidskrift. 40 , 84-95
[Magazine article]

Arhipova, Natalija (2012). Heart rot of spruce and alder in forests of Latvia. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2012:49
ISBN 978-91-576-7696-2
[Doctoral thesis]

Arnerup, Jenny (2011). Induced defence responses in Picea abies triggered by Heterobasidion annosum s.l. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2011:46
ISBN 978-91-576-7590-3
[Doctoral thesis]

B

Baillargeon, Natalie and Pold, Grace and Natali, Susan M. and Sistla, Seeta A. (2022). Lowland tundra plant stoichiometry is somewhat resilient decades following fire despite substantial and sustained shifts in community structure. Arctic, Antarctic, and Alpine Research. 54 :1 , 525-536
[Research article]

Bakys, Remigijus (2013). Dieback of Fraxinus excelsior in the Baltic Sea Region. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2013:10
ISBN 978-91-576-7767-9
[Doctoral thesis]

Bakys, Remigijus and Bajerkevičienė, Gintarė and Pliura, Alfas and Marčiulynas, Adas and Marčiulynienė, Diana and Lynikienė, Jūratė and Mishcherikova, Valeriia and Menkis, Audrius (2022). Fungal Communities in Re-Emerging Fraxinus excelsior Sites in Lithuania and Their Antagonistic Potential against Hymenoscyphus fraxineus. Microorganisms. 10 :10 , 1940
[Research article]

Bakys, Remigijus and Pliura, Alfas and Bajerkeviciene, Gintare and Marciulynas, Adas and Marciulyniene, Diana and Lynikiene, Jurate and Menkis, Audrius (2022). Mycobiota Associated with Symptomatic and Asymptomatic Fraxinus excelsior in Post-Dieback Forest Stands. Forests. 13 :10 , 1609
[Research article]

Bapela, Theresa and Shimelis, Hussein and Terefe, Tarekegn and Bourras, Salim and Sanchez-Martin, Javier and Douchkov, Dimitar and Tsilo, Toi John (2023). Breeding Wheat for Powdery Mildew Resistance: Genetic Resources and Methodologies-A Review. Agronomy. 13 :4 , 1173
[Article Review/Survey]

Barklund, Pia (2007). Askskottsjuka. Uppsala: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. Faktablad om växtskydd. Trädgård ; 198 T
[Factsheet]

Ben Amira, Maroua and Faize, Mohamed and Karlsson, Magnus and Dubey, Mukesh and Frac, Magdalena and Panek, Jacek and Fumanal, Boris and Gousset-Dupont, Aurelie and Julien, Jean-Louis and Chaar, Hatem and Auguin, Daniel and Mom, Robin and Label, Philippe and Venisse, Jean-Stephane (2021). Fungal X-Intrinsic Protein Aquaporin from Trichoderma atroviride: Structural and Functional Considerations. Biomolecules. 11 , 338
[Research article]

Bengtsson, Stina (2013). Dieback of Fraxinus excelsior. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2013:18
ISBN 978-91-576-7775-4
[Doctoral thesis]

Berihu, Maria and Somera, Tracey S. and Malik, Assaf and Medina, Shlomit and Piombo, Edoardo and Tal, Ofir and Cohen, Matan and Ginatt, Alon and Ofek-Lalzar, Maya and Doron-Faigenboim, Adi and Freilich, Shiri and Mazzola, Mark (2023). A framework for the targeted recruitment of crop-beneficial soil taxa based on network analysis of metagenomics data. Microbiome. 11 :1 , 8
[Research article]

Berlin, Anna (2012). Population biology of Puccinia graminis. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2012:79
ISBN 978-91-576-7726-6
[Doctoral thesis]

Bharadwaj, Dharam Parkash (2007). The plant – arbuscular mycorrhizal fungi – bacteria – pathogen system. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2007:90
ISBN 978-91-576-7389-3
[Doctoral thesis]

Bila, João (2016). Coconut lethal yellowing phytoplasma disease in Mozambique. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2016:33
ISBN 978-91-576-8568-1
eISBN 978-91-576-8569-8
[Doctoral thesis]

Bjelke, Ulf and Boberg, Johanna and Oliva Palau, Jonàs and Tattersdill, Kristina and Mckie, Brendan (2016). Dieback of riparian alder caused by the Phytophthora alni complex: projected consequences for stream ecosystems. Freshwater biology. 61 :5 , 565-579
[Article Review/Survey]

Björklund, Niklas and Boberg, Johanna (2022). Nya växtskadegörare – varför utgör de ett växande problem och vad kan vi göra åt det? Kungl. Skogs- och Lantbruksakademiens tidskrift (KSLAT). 161 :7 , 44-47
[Magazine article]

Blandón-Díaz, Jorge Ulises (2011). Insights into population structure and epidemiology of Phytophthora infestans from Nicaragua. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2011:36
ISBN 978-91-576-7581-1
[Doctoral thesis]

Blaszkowski, Janusz and Sanchez-Garcia, Marisol and Niezgoda, Piotr and Zubek, Szymon and Fernandez, Felix and Vila, Ana and Al-Yahya'ei, Mohamed N. and Symanczik, Sarah and Milczarski, Pawel and Malinowski, Ryszard and Cabello, Marta and Goto, Bruno Tomio and Casieri, Leonardo and Malicka, Monika and Bierza, Wojciech and Magurno, Franco (2022). A new order, Entrophosporales, and three new Entrophospora species in Glomeromycota. Frontiers in Microbiology. 13 , 962856
[Research article]

Blixt, Eva (2009). On Phaeosphaeria nodorum in wheat. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2009:1
ISBN 978-91-86195-48-9
[Doctoral thesis]

Boberg, Johanna (2009). Litter decomposing fungi in boreal forests. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2009:75
ISBN 978-91-576-7422-7
[Doctoral thesis]

Boberg, Johanna and Klapwijk, Maartje and Stenlid, Jan and Björkman, Christer (2014). Skadegörarna utmanar skogen. Umeå: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. ; Juni 201
[Factsheet]

Borgström, Pernilla and Jasarevic, Milena and Wallenhammar, Ann-Charlotte and Anderson, Peter and Friberg, Hanna and Larsson, Mattias and Lundin, Ola (2019). Växtskydd i raps, åkerbönor och ärter. Uppsala: (LTJ, LTV) > Department of Plant Protection Biology
(NL, NJ) > Dept. of Ecology
(S) > Dept. of Ecology
(NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet.
[Report]

Brandrud, T. E. and Gorbunova, I. A. and Ageev, D. V. and Dahlberg, Anders and Dima, B. and Morozova, O. V. and Svetasheva, T. YU. (2019). New Data on Cortinarius funga (Agaricales, Basidiomycota) from Altaiskiy nature reserve and Gorno-Altaysk area (SW Siberia, Russia). Mikologiâ i fitopatologiâ. 53 , 325-341
[Research article]

Broberg, Martin and Dubey, Mukesh and Iqbal, Mudassir and Gudmundsson, Mikael and Ihrmark, Katarina and Schroers, Hans-Josef and Jensen, Dan Funck and Brandström Durling, Mikael and Karlsson, Magnus (2021). Comparative genomics highlights the importance of drug efflux transporters during evolution of mycoparasitism in Clonostachys subgenus Bionectria (Fungi, Ascomycota, Hypocreales). Evolutionary applications. 14 , 476-497
[Research article]

Brodde, Laura (2023). Diplodia tip blight affecting Scots pine. Factors determining infection and spread in Swedish forests. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880
ISBN 978-91-8046-138-2
eISBN 978-91-8046-139-9
[Doctoral thesis]

Brodde, Laura and Adamson, Kalev and Julio Camarero, J. and Castano, Carles and Drenkhan, Rein and Lehtijärvi, Asko and Luchi, Nicola and Migliorini, Duccio and Sanchez-Miranda, Angela and Stenlid, Jan and Özdag, Sule and Oliva, Jonàs (2019). Diplodia Tip Blight on Its Way to the North: Drivers of Disease Emergence in Northern Europe. Frontiers in Plant Science. 9 , 1-12
[Research article]

Bubolz, Jéssica and Sleboda, Patrycja and Lehrman, Anna and Hansson, Sven Ove and Lagerkvist, Carl-Johan and Andersson, Björn and Lenman, Marit and Resjö, Svante and Ghislain, Marc and Zahid, Muhammad Awais and Kieu Phuong, Nam and Andreasson, Erik (2022). Genetically modified (GM) late blight-resistant potato and consumer attitudes before and after a field visit. GM Crops and Food Biotechnology in Agriculture and the Food Chain. 13 :1 , 290-298
[Research article]

Buck, Moritz and Garcia, Sarahi L. and Fernandez, Leyden and Martin, Gaëtan and Saarenheimo, Jatta and Zopfi, Jakob and Bertilsson, Stefan and Peura, Sari (2021). Comprehensive dataset of shotgun metagenomes from oxygen stratified freshwater lakes and ponds. Scientific Data. 8 , 131
[Research article]

Burdon, Jeremy J. and Zhan, Jiasui (2020). Climate change and disease in plant communities. PLoS Biology. 18 , e3000949
[Research article]

Bödeker, Inga (2012). Functional ecology of ectomycorrhizal fungi. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2012:36
ISBN 978-91-576-7672-6
[Doctoral thesis]

Bösch, Yvonne (2022). Ecology of fungal denitrifiers in terrestrial ecosystems : global patterns and effects of management in agricultural soils. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880
ISBN 978-91-7760-977-3
eISBN 978-91-7760-978-0
[Doctoral thesis]

Bösch, Yvonne and Britt, Elisabeth and Perren, Sarah and Naef, Andreas and Frey, Jurg E. and Buhlmann, Andreas (2021). Dynamics of the Apple Fruit Microbiome after Harvest and Implications for Fruit Quality. Microorganisms. 9 , 272
[Research article]

Bösch, Yvonne and Jones, Christopher and Finlay, Roger and Karlsson, Magnus and Larsbo, Mats and Keller, Thomas and Hallin, Sara (2022). Minimizing tillage modifies fungal denitrifier communities, increases denitrification rates and enhances the genetic potential for fungal, relative to bacterial, denitrification. Soil Biology and Biochemistry. 170 , 108718
[Research article]

Bötzl, Fabian and Douhan Sundahl, Anna and Friberg, Hanna and Viketoft, Maria and Bergkvist, Göran and Lundin, Ola (2023). Undersowing oats with clovers supports pollinators and suppresses arable weeds without reducing yields. Journal of Applied Ecology. 60 :4 , 614-623
[Research article]

C

Caballol, Maria and Straus, Dora and Macia, Hector and Ramis, Xavier and Redondo, Miguel Angel and Oliva, Jonas (2021). Halophytophthora fluviatilis Pathogenicity and Distribution along a Mediterranean-Subalpine Gradient. Journal of Fungi. 7 , 112
[Research article]

Capador-Barreto, Hernán Dario (2022). Genetics of disease resistance in Norway spruce (Picea abies) : a look in the past with an eye to the future. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880
ISBN 978-91-7760-881-3
eISBN 978-91-7760-882-0
[Doctoral thesis]

Capador-Barreto, Hernán Dario and Bernhardsson, Carolina and Milesi, Pascal and Vos, Ingrid and Lundén, Karl and Wu, Harry and Karlsson, Bo and Ingvarsson, Pär and Stenlid, Jan and Elfstrand, Malin (2021). Killing two enemies with one stone? Genomics of resistance to two sympatric pathogens in Norway spruce. Molecular Ecology. 30 , 4433-4447
[Research article]

Capador-Barreto, Hernán Dario and Samils, Berit and Kaitera, Juha and Olson, Åke (2020). Genetic evidence for sexual reproduction and multiple infections of Norway spruce cones by the rust fungus Thekopsora areolata. Ecology and Evolution. 10 , 7389-7403
[Research article]

Castaño Soler, Carles and Berlin, Anna and Brandström Durling, Mikael and Ihrmark, Katarina and Lindahl, Björn and Stenlid, Jan and Engelbrecht Clemmensen, Karina and Olson, Åke (2020). Optimized metabarcoding with Pacific biosciences enables semi-quantitative analysis of fungal communities. New Phytologist. 228 , 1149-1158
[Research article]

Centenaro, Giada and de-Miguel, Sergio and Amouzgar, Laleh and Piñuela, Yasmine and Son, Deokjoo and Bonet, José Antonio and Martínez de Aragón, Juan and Dashevskaya, Svetlana and Castaño Soler, Carles and Alday, Josu G. (2023). Silvicultural management and altitude prevail on soil properties and fungal community in shaping understorey plant communities in a Mediterranean pine forest. Science of the Total Environment. 858 , 159860
[Research article]

Cervantes, Francisco J. and Garcia, Sarahi L. and Peura, Sari and Balagurusamy, Nagamani (2021). Editorial: Methanotrophs: Diversity, Environmental Relevance and Applications. Frontiers in Microbiology. 12 , 796861
[Editorial]

Charova, Spyridoula N. and Dolfors, Fredrik and Holmquist, Louise and Moschou, Panagiotis Nikolaou and Dixelius, Christina and Tzelepis, Georgios (2020). The RsRlpA Effector Is a Protease Inhibitor Promoting Rhizoctonia solani Virulence through Suppression of the Hypersensitive Response. International Journal of Molecular Sciences. 21 , 8070
[Research article]

Chaudhary, Rajiv (2020). Identification of molecular markers associated with fungal resistance in Norway spruce and common ash. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2020:37
ISBN 978-91-7760-592-8
eISBN 978-91-7760-593-5
[Doctoral thesis]

Chaudhary, Rajiv and Lundén, Karl and Dalman, Kerstin and Dubey, Mukesh and Nemesio Gorriz, Miguel and Karlsson, Bo and Stenlid, Jan and Elfstrand, Malin (2020). Combining transcriptomics and genetic linkage based information to identify candidate genes associated with Heterobasidion-resistance in Norway spruce. Scientific Reports. 10 , 12711
[Research article]

Chaudhary, Rajiv and Rönneburg, Tilman and Stein Åslund, Matilda and Lundén, Karl and Brandström Durling, Mikael and Ihrmark, Katarina and Menkis, Audrius and Stener, Lars-Göran and Elfstrand, Malin and Cleary, Michelle and Stenlid, Jan (2020). Marker-Trait Associations for Tolerance to Ash Dieback in Common Ash (Fraxinus excelsior L.). Forests. 11 , 1083
[Research article]

Cheeke, Tanya and Phillips, Richard P. and Kuhn, Alexander and Rosling, Anna and Fransson, Petra (2021). Variation in hyphal production rather than turnover regulates standing fungal biomass in temperate hardwood forests. Ecology. 102 , e03260
[Research article]

Chen, Zhiqiang and Zan, Yanjun and Milesi, Pascal and Zhou, Linghua and Chen, Jun and Milani, Lili and Cui, BinBin and Niu, Shihui and Westin, Johan and Karlsson, Bo and Garcia Gil, Rosario and Lascoux, Martin and Wu, Harry (2021). Leveraging breeding programs and genomic data in Norway spruce (Picea abies L. Karst) for GWAS analysis. Genome Biology. 22 , 179
[Research article]

Choudhury, Maidul and Hallin, Sara and Ecke, Frauke and Hubalek, Valerie and Juhanson, Jaanis and Frainer, André and Mckie, Brendan (2022). Disentangling the roles of plant functional diversity and plaint traits in regulating plant nitrogen accumulation and denitrification in freshwaters. Functional Ecology. 36 :4 , 921-932
[Research article]

D

Dahlberg, Anders (2017). Hyggesfritt eller kalhyggesbruk? Biodiverse. 22 , 20-21
[Magazine article]

Dalman, Kerstin (2010). Heterobasidion root rot. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2010:81
ISBN 978-91-576-7526-2
[Doctoral thesis]

Dalman, Kerstin and Himmelstrand, Kajsa and Olson, Åke and Lind, Mårten and Brandström Durling, Mikael and Stenlid, Jan (2013). A Genome-Wide Association Study Identifies Genomic Regions for Virulence in the Non-Model Organism Heterobasidion annosum ss. PLoS One. 8 :1 , 1-10
[Research article]

Davydenko, Kateryna (2021). Occurrence and pathogenicity of tree-pathogenic fungi vectored by bark beetles. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880
ISBN 978-91-7760-728-1
eISBN 978-91-7760-729-8
[Doctoral thesis]

Davydenko, Kateryna and Skrylnyk, Yuriy and Borysenko, Oleksandr and Menkis, Audrius and Vysotska, Natalia and Meshkova, Valentyna and Olson, Åke and Elfstrand, Malin and Vasaitis, Rimvydas (2022). Invasion of Emerald Ash Borer Agrilus planipennis and Ash Dieback Pathogen Hymenoscyphus fraxineus in Ukraine-A Concerted Action. Forests. 13 :5 , 789
[Research article]

Davydenko, Kateryna and Vasaitis, Rimvydas and Elfstrand, Malin and Baturkin, Denys and Menkis, Audrius and Meshkova, Valentyna (2021). Fungal Communities Vectored by Ips sexdentatus in Declining Pinus sylvestris in Ukraine: Focus on Occurrence and Pathogenicity of Ophiostomatoid Species. Insects. 12 , 1119
[Research article]

Davydenko, Kateryna and Vasaitis, Rimvydas and Menkis, Audrius (2017). Fungi associated with Ips acuminatus (Coleoptera: Curculionidae) in Ukraine with a special emphasis on pathogenicity of ophiostomatoid species. European journal of entomology. 114 , 77-85
[Research article]

Desiderio, Francesca and Bourras, Salim and Mazzucotelli, Elisabetta and Rubiales, Diego and Keller, Beat and Cattivelli, Luigi and Vale, Giampiero (2021). Characterization of the Resistance to Powdery Mildew and Leaf Rust Carried by the Bread Wheat Cultivar Victo. International Journal of Molecular Sciences. 22 , 3109
[Research article]

Dhawan, O P and Dubey, Mukesh and Singh, S.K. (2014). Relationship of downy mildew resistance with marker and yield related traits helpful for achieving reliable selection criteria in Opium Poppy (Papaver somniferum L.). I/In: International Symposium on Papaver, 7-11 February, 2011, Lucknow, India.
[Conference Paper]

Diaz-Yanez, Olalla and Mola-Yudego, Blas and Timmermann, Volkmar and Tollefsrud, Mari Mette and Hietala, Ari M. and Oliva, Jonàs (2020). The invasive forest pathogen Hymenoscyphus fraxineus boosts mortality and triggers niche replacement of European ash (Fraxinus excelsior). Scientific Reports. 10 , 5310 , 1-10
[Research article]

Djupström, Line and Dahlberg, Anders and Lindahl, Björn (2022). Nyttan av naturhänsyn för marksvampar : resultat fem år efter avverkning. (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology
(NL, NJ) > Dept. of Soil and Environment
(S) > Dept. of Soil and Environment, Sveriges lantbruksuniversitet. Arbetsrapport / Skogforsk ; 1116
[Report]

Djurle, Annika (2017). Vetets brunfläcksjuka. Uppsala: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. Faktablad om växtskydd. Jordbruk ; 12 J
[Factsheet]

Djurle, Annika and Sandström, Magnus (2017). Sköldfläcksjuka. Uppsala: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. Faktablad om växtskydd. Jordbruk ; 9 J
[Factsheet]

Do, Thi Xuan (2012). Microbial communities in paddy fields in the Mekong delta of Vietnam. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2012:101
ISBN 978-91-576-7748-8
[Doctoral thesis]

Domeignoz-Horta, Luiz A. and Pold, Grace and Erb, Hailey and Sebag, David and Verrecchia, Eric and Northen, Trent and Louie, Katherine and Eloe-Fadrosh, Emiley and Pennacchio, Christa and Knorr, Melissa A. and Frey, Serita D. and Melillo, Jerry M. and DeAngelis, Kristen M. (2023). Substrate availability and not thermal acclimation controls microbial temperature sensitivity response to long-term warming. Global Change Biology. 29 :6 , 1574-1590
[Research article]

Drenkhan, Rein and Ganley, Beccy and Martin-Garcia, Jorge and Vahalik, Petr and Adamson, Kalev and Adamcikova, Katarina and Ahumada, Rodrigo and Blank, Lior and Braganca, Helena and Capretti, Paolo and Cleary, Michelle and Cornejo, Carolina and Davydenko, Kateryna and Diez, Julio J. and Lehtijarvi, Hatice Tugba Dogmus and Dvorak, Milon and Enderle, Rasmus and Fourie, Gerda and Georgieva, Margarita and Ghelardini, Luisa and Hantula, Jarkko and Ioos, Renaud and Iturritxa, Eugenia and Kanetis, Loukas and Karpun, Natalia N. and Koltay, Andras and Landeras, Elena and Markovskaja, Svetlana and Mesanza, Nebai and Milenkovic, Ivan and Musolin, Dmitry L. and Nikolaou, Konstantinos and Nowakowska, Justyna A. and Ogris, Nikica and Oskay, Funda and Oszako, Tomasz and Paraschiv, Marius and Pasquali, Matias and Pecori, Francesco and Rafoss, Trond and Raitelaityte, Kristina and Raposo, Rosa and Robin, Cecile and Rodas, Carlos A. and Santini, Alberto and Sanz-Ros, Antonio and Selikhovkin, Andrey and Solla, Alejandro and Soukainen, Mirkka and Soulioti, Nikoleta and Steenkamp, Emma T. and Tsopelas, Panaghiotis and Vemic, Aleksandar and Vettraino, Anna Maria and Wingfield, Michael J. and Woodward, Stephen and Zamora-Ballesteros, Cristina and Mullett, Martin S. (2020). Global Geographic Distribution and Host Range ofFusarium circinatum, the Causal Agent of Pine Pitch Canker. Forests. 11 , 724 , 1-40
[Article Review/Survey]

Dubey, Mukesh (2021). Biological Control of Plant Diseases in Changing Environment. Agronomy. 11 , 2000
[Editorial]

Dubey, Mukesh and Jensen, Dan Funck and Karlsson, Magnus (2021). Functional characterization of the AGL1 aegerolysin in the mycoparasitic fungusTrichoderma atroviridereveals a role in conidiation and antagonism. Molecular Genetics and Genomics. 296 , 131-140
[Research article]

Dubey, Mukesh and Vélëz, Heriberto and Broberg, Martin and Jensen, Dan Funck and Karlsson, Magnus (2020). LysM Proteins Regulate Fungal Development and Contribute to Hyphal Protection and Biocontrol Traits in Clonostachys rosea. Frontiers in Microbiology. 11 , 679 , 1-19
[Research article]

Durkin, Louisa and Jansson, Tobias and Sanchez-Garcia, Marisol and Khomich, Maryia and Ryberg, Martin and Kristiansson, Erik and Nilsson, R. Henrik (2020). When mycologists describe new species, not all relevant information is provided (clearly enough). MycoKeys. 72 , 109-128
[Research article]

E

Eckersten, Henrik and Djurle, Annika and Albihn, Ann and Båge, Renee and Andersson, Lars and de Toro, Alfredo and Gärdenäs, Annemieke I and Hultgren, Jan and Kvarnheden, Anders and Lewan, Elisabet and Nkurunziza, Libére and Rosén, Klas and Spörndly, Rolf and Vågsholm, Ivar and Von Rosen, Dietrich and Yuen, Jonathan and Magnusson, Ulf (2015). Framtida risker och hot mot svensk spannmåls- respektive mjölkproduktion. Uppsala: (NL, NJ) > Dept. of Crop Production Ecology
(NL, NJ) > Dept. of Soil and Environment
(S) > Dept. of Soil and Environment
(NL, NJ) > Dept. of Energy and Technology
(NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology
(NL, NJ) > Department of Plant Biology (from 140101)
(VH) > Dept. of Animal Environment and Health
(VH) > Dept. of Clinical Sciences
(VH) > Dept. of Biomedical Sciences and Veterinary Public Health
(VH) > Dept. of Animal Nutrition and Management, Sveriges lantbruksuniversitet.
[Report]

Edesi, Jaanika and Tikkinen, Mikko and Elfstrand, Malin and Olson, Åke and Varis, Saila and Egertsdotter, Ulrika and Aronen, Tuija (2021). Root Rot Resistance Locus PaLAR3 Is Delivered by Somatic Embryogenesis (SE) Pipeline in Norway Spruce (Picea abies (L.) Karst.). Forests. 12 , 193
[Research article]

Edin, Eva (2011). Fungicider och fungicidresistens. Uppsala: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. Faktablad om växtskydd. Jordbruk ; 33 J
[Factsheet]

Edin, Eva (2011). Torrfläcksjuka på potatis. Uppsala: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. Faktablad om växtskydd. Jordbruk ; 128 J
[Factsheet]

Edin, Eva and Gulsher, Mehreen and Andersson Franko, Mikael and Englund, Jan-Eric and Flöhr, Adam and Kardell, Jonas and Viketoft, Maria (2019). Temporal Interactions between Root-Lesion Nematodes and the Fungus Rhizoctonia Solani Lead to Reduced Potato Yield. Agronomy. 9 , 1-17
[Research article]

Edlinger, Anna and Garland, Gina and Banerjee, Samiran and Degrune, Florine and Garcia-Palacios, Pablo and Herzog, Chantal and Pescador, David Sanchez and Romdhane, Sana and Ryo, Masahiro and Saghai, Aurélien and Hallin, Sara and Maestre, Fernando T. T. and Philippot, Laurent and Rillig, Matthias C. C. and van Der Heijden, Marcel G. A. (2023). The impact of agricultural management on soil aggregation and carbon storage is regulated by climatic thresholds across a 3000 km European gradient. Global Change Biology. 29 :11 , 3177-3192
[Research article]

Ejiofor, Toochukwu and Mgbeahuruike, Anthony Christian and Ojiako, Chiamaka and Ushie, Ashang Micheal and Nwoko, Emmanuela Ifeoma and Onoja, Ibe Remigius and Dada, Toluwase and Mwanza, Mulunda and Karlsson, Magnus (2021). Saccharomyces cerevisiae, bentonite, and kaolin as adsorbents for reducing the adverse impacts of mycotoxin contaminated feed on broiler histopathology and hemato-biochemical changes. Veterinary World. 14 , 23-32
[Research article]

Elfstrand, Malin and Baison, John and Lundén, Karl and Zhou, Linghua and Vos, Ingrid and Capador-Barreto, Hernán Dario and Stein Åslund, Matilda and Chen, Zhiqiang and Chaudhary, Rajiv and Olson, Åke and Wu, Harry (2020). Association genetics identifies a specifically regulated Norway spruce laccase gene, PaLAC5, linked to Heterobasidion parviporum resistance. Plant, Cell and Environment. 43 , 1779-1791
[Research article]

Elfstrand, Malin and Chen, Jun and Cleary, Michelle and Halecker, Sandra and Ihrmark, Katarina and Karlsson, Magnus and Davydenko, Kateryna and Stenlid, Jan and Stadler, Marc and Brandström Durling, Mikael (2021). Comparative analyses of the Hymenoscyphus fraxineus and Hymenoscyphus albidus genomes reveals potentially adaptive differences in secondary metabolite and transposable element repertoires. BMC Genomics. 22 , 503
[Research article]

Emery, Sara and Anderson, Peter and Carlsson, Georg and Friberg, Hanna and Larsson, Mattias and Wallenhammar, Ann-Charlotte and Lundin, Ola (2021). The Potential of Intercropping for Multifunctional Crop Protection in Oilseed Rape (Brassica napus L.). Frontiers in Agronomy. 3 , 782686
[Research article]

Engelbrecht Clemmensen, Karina and Brandström Durling, Mikael and Michelsen, Anders and Hallin, Sara and Finlay, Roger and Lindahl, Björn (2021). A tipping point in carbon storage when forest expands into tundra is related to mycorrhizal recycling of nitrogen. Ecology Letters. 24 , 1193-1204
[Research article]

Eriksson, Bengt (1997). Nematoder - världens vanligaste djur. Uppsala: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. Faktablad om växtskydd. Jordbruk ; 84 J
[Factsheet]

F

Fahad, Zaenab Adnan (2017). The role of biological processes in base cation supply in boreal forest podzols. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2017:23
ISBN 978-91-576-8819-4
eISBN 978-91-576-8820-0
[Doctoral thesis]

Felton, Adam and Nilsson, Urban and Sonesson, Johan and Felton, Annika and Roberge, Jean-Michel and Ranius, Thomas and Ahlström, Martin and Bergh, Johan and Björkman, Christer and Boberg, Johanna and Drössler, Lars and Fahlvik, Nils and Gong, Peichen and Holmström, Emma and Keskitalo, Carina and Klapwijk, Maartje and Laudon, Hjalmar and Lundmark, Tomas and Niklasson, Mats and Nordin, Annika and Pettersson, Maria and Stenlid, Jan and Sténs, Anna and Wallertz, Kristina (2016). Replacing monocultures with mixed-species stands: Ecosystem service implications of two production forest alternatives in Sweden. Ambio. 45 :Suppl. 2 , S124-S139
[Research article]

Felton, Adam and Nilsson, Urban and Sonesson, Johan and Felton, Annika and Roberge, Jean-Michel and Ranius, Thomas and Ahlström, Martin and Bergh, Johan and Björkman, Christer and Boberg, Johanna and Drössler, Lars and Fahlvik, Nils and Gong, Peichen and Holmström, Emma and Keskitalo, Carina and Klapwijk, Maartje and Laudon, Hjalmar and Lundmark, Tomas and Niklasson, Mats and Nordin, Annika and Pettersson, Maria and Stenlid, Jan and Sténs, Anna and Wallertz, Kristina (2016). Replacing monocultures with mixed-species stands: Ecosystem service implications of two production forest alternatives in Sweden. Ambio. 45 :Suppl 2 , S124-S139
[Research article]

Fernandez, Leyden and Peura, Sari and Eiler, Alexander and Linz, Alexandra M. and McMahon, Katherine D. and Bertilsson, Stefan (2020). Diazotroph Genomes and Their Seasonal Dynamics in a Stratified Humic Bog Lake. Frontiers in Microbiology. 11 , 1500 , 1-16
[Research article]

Fetsiukh, Anastasiia and Conrad, Julian and Bergquist, Jonas and Timmusk, Salme (2021). Silica Particles Trigger the Exopolysaccharide Production of Harsh Environment Isolates of Growth-Promoting Rhizobacteria and Increase Their Ability to Enhance Wheat Biomass in Drought-Stressed Soils. International Journal of Molecular Sciences. 22 , 6201
[Research article]

Finlay, Roger and Mahmood, Shahid and Rosenstock, Nicholas and Bolou-Bi, Emile B. and Köhler, Stephan and Fahad, Zaenab and Rosling, Anna and Wallander, Hakan and Belyazid, Salim and Bishop, Kevin and Lian, Bin (2020). Reviews and syntheses: Biological weathering and its consequences at different spatial levels - from nanoscale to global scale. Biogeosciences. 17 , 1507-1533
[Article Review/Survey]

Forsmark, Benjamin and Nordin, Annika and Maaroufi, Nadia and Lundmark, Tomas and Gundale, Michael (2020). Low and High Nitrogen Deposition Rates in Northern Coniferous Forests Have Different Impacts on Aboveground Litter Production, Soil Respiration, and Soil Carbon Stocks. Ecosystems. 23 , 1423-1436
[Research article]

Fransson, Petra and Hoeber, Stefanie and Baum, Christel and Weih, Martin and Manzoni, Stefano and Fransson, Petra (2021). Site-dependent relationships between fungal community composition, plant genotypic diversity and environmental drivers in a Salix biomass system. Frontiers in fungal biology. 2 , 671270
[Research article]

Franzén, Ina (2008). Population genetics of the red-listed wood-decay fungus Phlebia centrifuga. Uppsala : Sveriges lantbruksuniv.
ISBN 978-91-85911-38-7
[Licentiate thesis]

Friberg, Hanna and Persson, Paula and Jensen, Dan Funck and Bergkvist, Göran (2019). Preceding crop and tillage system affect winter survival of wheat and the fungal communities on young wheat roots and in soil. FEMS Microbiology Letters. 366 , 1-7
[Research article]

G

Garcia, Sarahi L. and Mehrshad, Maliheh and Buck, Moritz and Tsuji, Jackson M. and Neufeld, Josh D. and McMahon, Katherine D. and Bertilsson, Stefan and Greening, Christian and Peura, Sari (2021). Freshwater Chlorobia exhibit metabolic specialization among cosmopolitan and endemic populations. mSystems. 6 , e01196-20
[Research article]

Gkarmiri, Konstantia (2018). Interactions of fungal pathogens and antagonistic bacteria in the rhizosphere of Brassica napus. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2018:4
ISBN 978-91-7760-148-7
eISBN 978-91-7760-149-4
[Doctoral thesis]

Gomez-Gallego, Mireia and Williams, Nari and Leuzinger, Sebastian and Scott, Peter Matthew and Bader, Martin Karl-Friedrich (2020). No carbon limitation after lower crown loss in Pinus radiata. Annals of Botany. 125 , 955-967
[Research article]

Gomez-Gallego, Mireia and Gomez-Gallego, Mireia and Galiano, Lucia and Martinez-Vilalta, Jordi and Stenlid, Jan and Capador-Barreto, Hernán Dario and Elfstrand, Malin and Camarero, J. Julio and Oliva, Jonas (2022). Interaction of drought- and pathogen-induced mortality in Norway spruce and Scots pine. Plant, Cell and Environment
[Research article]

Gonthier, Paolo and Sillo, Fabiano and Lagostina, Elisa and Roccotelli, Angela and Cacciola, Santa Olga and Stenlid, Jan and Garbelotto, Matteo (2015). Selection processes in simple sequence repeats suggest a correlation with their genomic location: insights from a fungal model system. BMC Genomics. 16 , 1-12
[Research article]

Graf, Daniel and Jones, Christopher and Zhao, Enid Ming and Hallin, Sara (2022). Assembly of root-associated N₂O-reducing communities of annual crops is governed by selection for nosZ Glade I over Glade II. FEMS Microbiology Ecology. 98 :9
[Research article]

Gustavsson, Cecilia and Andersson-Sunden, Erik and Barker, Abigail and Hjalmarsson, Anders and Lantz, Mattias and Lundén, Karl and Pomp, Stephan (2020). Citizen science in radiation research. I/In: International Conference on Nuclear Data for Science and Technology (ND), MAY 19-24, 2019, Beijing, PEOPLES R CHINA.
[Conference Paper]

H

Hadji Mollahossein, Sara (2015). Host-pathogen interactions in root infecting oomycete species. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:9
ISBN 978-91-576-8216-1
eISBN 978-91-576-8217-8
[Doctoral thesis]

Hagenbo, Andreas (2017). Ectomycorrhizal fungal mycelial dynamics and its role in forest soil carbon cycling. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2014:27
ISBN 978-91-576-8827-9
eISBN 978-91-576-8828-6
[Doctoral thesis]

Hallberg, Lukas and Hallin, Sara and Bieroza, Magdalena (2022). Catchment controls of denitrification and nitrous oxide production rates in headwater remediated agricultural streams. Science of the Total Environment. 838 :Part 3 , 156513
[Research article]

Hallin, Sara (2023). Environmental microbiology going computational-Predictive ecology and unpredicted discoveries. Environmental Microbiology. 25 :1 , 111-114
[Other publication in scientific journal]

Hallin, Sara and Bodelier, Paul L. E. (2020). Grand Challenges in Terrestrial Microbiology: Moving on From a Decade of Progress in Microbial Biogeochemistry. Frontiers in Microbiology. 11 , 981 , 1-5
[Other publication in scientific journal]

Hallin, Sara and Jeanbille, Mathilde and Engelbrecht Clemmensen, Karina and Juhanson, Jaanis and Michelsen, Anders and Cooper, Elisabeth J. and Henry, Greg H.R. and Hofgaard, Annika and Hollister, Robert D. and Jónsdóttir, Ingibjörg S. and Klanderud, Kari and Tolvanen, Anne (2021). Site-specific responses of fungal and bacterial abundances to experimental warming in litter and soil across arctic and alpine tundra. Arctic science
[Research article]

He, Dun-Chun and Burdon, Jeremy J and Xie, Lian-Hui and Zhan, Jiasui (2021). Triple bottom-line consideration of sustainable plant disease management: From economic, sociological and ecological perspectives. Journal of Integrative Agriculture. 20 , 2581-2591
[Article Review/Survey]

He, Dun-Chun and He, Meng-Han and Amalin, Divina M. and Liu, Wei and Alvindia, Dionisio G. and Zhan, Jiasui (2021). Biological Control of Plant Diseases: An Evolutionary and Eco-Economic Consideration. Pathogens. 10 , 1311
[Article Review/Survey]

He, Dun-Chun and Ma, Yan-Li and Li, Zhuan-Zhuan and Zhong, Chang-Sui and Cheng, Zhao-Bang and Zhan, Jiasui (2021). Crop Rotation Enhances Agricultural Sustainability: From an Empirical Evaluation of Eco-Economic Benefits in Rice Production. Agriculture. 11 , 91
[Research article]

Heller, Gregory (2008). Transcription analysis of Pinus sylvestris during ectomycorrhizal development. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2008:21
ISBN 978-91-85913-54-1
[Doctoral thesis]

Hellman, Maria (2022). Microbial communities and nitrogen cycling functions in barrier systems for treatment of nitrogen polluted water. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880
ISBN 978-91-7760- 967-4
eISBN 978-91-7760- 968-1
[Doctoral thesis]

Hellman, Maria (2018). Microbial nitrate removal from mining waters. Uppsala : Sveriges lantbruksuniv.
ISBN 978-91-576-9589-5
eISBN 978-91-576-9590-1
[Licentiate thesis]

Hellman, Maria and Valhondo, Cristina and Martinez-Landa, Lurdes and Carrera, Jesus and Juhanson, Jaanis and Hallin, Sara (2022). Nitrogen Removal Capacity of Microbial Communities Developing in Compost- and Woodchip-Based Multipurpose Reactive Barriers for Aquifer Recharge With Wastewater. Frontiers in Microbiology. 13 , 877990
[Research article]

Herrera-Foessel, Sybil A. (2007). Enhancing the genetic diversity and durability of leaf rust resistance in durum wheat. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2007:1
ISBN 978-91-576-7300-8
[Doctoral thesis]

Heyman, Fredrik (2008). Root rot of pea caused by Aphanomyces euteiches. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2008:24
ISBN 978-91-85913-57-2
[Doctoral thesis]

Hoeber, Stefanie and Fransson, Petra and Weih, Martin and Manzoni, Stefano (2020). Leaf litter quality coupled to Salix variety drives litter decomposition more than stand diversity or climate. Plant and Soil. 453 , 313-328
[Research article]

Hu, Yang (2015). Understanding virulence of Heterobasidion annosum s.l., a root rot pathogen of conifers. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:118
ISBN 978-91-576-8434-9
eISBN 978-91-576-8435-6
[Doctoral thesis]

Hu, Yang and Elfstrand, Malin and Stenlid, Jan and Brandström Durling, Mikael and Olson, Åke (2020). The conifer root rot pathogens Heterobasidion irregulare and Heterobasidion occidentale employ different strategies to infect Norway spruce. Scientific Reports. 10 , 5884
[Research article]

I

Iqbal, Mudassir (2019). Biological control of plant-parasitic nematodes by the fungus Clonostachys rosea. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2019:72
ISBN 978-91-7760-462-4
eISBN 978-91-7760-463-1
[Doctoral thesis]

Iqbal, Mudassir and Broberg, Martin and Dubey, Mukesh and Viketoft, Maria and Jensen, Dan Funck and Karlsson, Magnus (2020). Genome-wide association identifies genomic regions in fungus Clonostachys rosea that influence antagonism and biocontrol of plant-parasitic nematodes.
[Conference abstract]

Iqbal, Mudassir and Broberg, Martin and Haarith, Deepak and Broberg, Anders and Bushley, Kathryn E. and Brandström Durling, Mikael and Viketoft, Maria and Jensen, Dan Funck and Dubey, Mukesh and Karlsson, Magnus (2020). Natural variation of root lesion nematode antagonism in the biocontrol fungus Clonostachys rosea and identification of biocontrol factors through genome‐wide association mapping. Evolutionary applications. 13 , 2264-2283
[Research article]

Iradukunda, Linda and Wang, Yan-Ping and Nkurikiyimfura, Oswald and Wang, Tian and Yang, Li-Na and Zhan, Jiasui (2022). Establishment and Application of a Multiplex PCR Assay for the Rapid Detection of Rhizoctonia solani Anastomosis Group (AG)-3PT, the Pathogen Causing Potato Black Scurf and Stem Canker. Pathogens. 11 :6 , 627
[Research article]

J

Jactel, Herve and Desprez-Loustau, Marie-Laure and Battisti, Andrea and Brockerhoff, Eckehard and Santini, Alberto and Stenlid, Jan and Björkman, Christer and Branco, Manuela and Dehnen-Schmutz, Katharina and Douma, Jacob C. and Drakulic, Jassy and Drizou, Fryni and Eschen, Rene and Franco, Jose Carlos and Gossner, Martin M. and Green, Samantha and Kenis, Marc and Klapwijk, Maartje and Liebhold, Andrew M. and Orazio, Christophe and Prospero, Simone and Robinet, Christelle and Schroeder, Martin and Slippers, Bernard and Stoev, Pavel and Sun, Jianghua and van den Dool, Robbert and Wingfield, Michael J. and Zalucki, Myron P. (2020). Pathologists and entomologists must join forces against forest pest and pathogen invasions. NeoBiota , 107-127
[Editorial]

Jalli, Marja and Kaseva, Janne and Andersson, Björn and Ficke, Andrea and Nistrup-Jorgensen, Lise and Ronis, Antanas and Kaukoranta, Timo and Orum, Jens-Erik and Djurle, Annika (2020). Yield increases due to fungicide control of leaf blotch diseases in wheat and barley as a basis for IPM decision-making in the Nordic-Baltic region. European Journal of Plant Pathology. 158 , 315-333
[Research article]

Jantti, Helena and Jilbert, Tom and Aalto, Sanni L. and Simojoki, Asko and Mangayil, Rahul and Peura, Sari and Rissanen, Antti J. (2022). The role of organic matter and microbial community controlling nitrate reduction under elevated ferrous iron concentrations in boreal lake sediments. Hydrobiologia. 849 :9 , 2145-2160
[Research article]

Jonsson, Mattias and Friberg, Hanna and Andersson, Björn and Andersson, Lars and Viketoft, Maria and Taylor, Astrid and Bommarco, Riccardo and Glimskär, Anders (2015). Invasiva arter och samordning kring växtskydd i miljöövervakning för åkermark. Uppsala: (NL, NJ) > Dept. of Crop Production Ecology
(NL, NJ) > Dept. of Ecology
(S) > Dept. of Ecology
(NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet.
[Report]

Jung, T. and Milenković, I. and Corcobado, T. and Májek, T. and Janoušek, J. and Kudláček, T. and Tomšovský, M. and Nagy, Z.Á. and Durán, A. and Tarigan, M. and Sanfuentes von Stowasser, E. and Singh, R. and Ferreira, M. and Webber, J.F. and Scanu, B. and Chi, N.M. and Thu, P.Q. and Junaid, M. and Rosmana, A. and Baharuddin, B. and Kuswinanti, T. and Nasri, N. and Kageyama, K. and Hieno, A. and Masuya, H. and Uematsu, S. and Oliva, J. and Redondo, Miguel Angel and Maia, C. and Kramarets, V. and O’Hanlon, R. and Tomić, Ž. and Brasier, C.M. and Horta Jung, M. (2022). Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications. Persoonia. 49 , 1-57
[Research article]

Juottonen, Heli and Fontaine, Laurent and Wurzbacher, Christian and Drakare, Stina and Peura, Sari and Eiler, Alexander (2020). Archaea in boreal Swedish lakes are diverse, dominated by Woesearchaeota and follow deterministic community assembly. Environmental Microbiology. 22 , 3158-3171
[Research article]

Jörgensen, Karolina and Engelbrecht Clemmensen, Karina and Wallander, Hakan and Lindahl, Björn (2023). Do ectomycorrhizal exploration types reflect mycelial foraging strategies? New Phytologist. 237 :2 , 576-584
[Research article]

K

Kalyandurg, Pruthvi Balachandra and Sundararajan, Poorva and Dubey, Mukesh and Ghadamgahi, Farideh and Zahid, Muhammad Awais and Whisson, Stephen C. and Vetukuri, Ramesh (2021). Spray-Induced Gene Silencing as a Potential Tool to Control Potato Late Blight Disease. Phytopathology. 111 :12 , 2168-2175
[Research article]

Kalyandurg, Pruthvi Balachandra and Sundararajan, Poorva and Dubey, Mukesh and Ghadamgahi, Farideh and Zahid, Muhammad Awais and Whisson, Stephen C. and Vetukuri, Ramesh (2021). Spray-Induced Gene Silencing as a Potential Tool to Control Potato Late Blight Disease. Phytopathology. 111 :12 , 2168-2175
[Research article]

Karlsson, Ida (2017). Ny kunskap om svampfloran på vetets blad. Växtskyddsnotiser. 71 :71, Apr , 4-6
[Magazine article]

Karlsson, Ida and Friberg, Hanna and Kolseth, Anna-Karin and Steinberg, Christian and Persson, Paula (2017). Agricultural factors affecting Fusarium communities in wheat kernels. International journal of food microbiology. 252 , 53-60
[Research article]

Karlsson, Ida and Friberg, Hanna and Steinberg, Christian and Persson, Paula (2014). Fungicide effects on fungal community composition in the wheat phyllosphere. PloS one. 9 :11 , e111786
[Research article]

Kluge, Mariana (2021). Diversity and functional potential of fungal communities in Arctic and boreal freshwaters. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880
ISBN 978-91-7760-819-6
eISBN 978-91-7760-820-2
[Doctoral thesis]

Kluge, Mariana and Wauthy, Maxime and Engelbrecht Clemmensen, Karina and Wurzbacher, Christian and Hawkes, Jeffrey A. and Einarsdottir, Karolina and Rautio, Milla and Stenlid, Jan and Peura, Sari (2021). Declining fungal diversity in Arctic freshwaters along a permafrost thaw gradient. Global Change Biology. 27 , 5889-5906
[Research article]

Kälin, Carol and Berlin, Anna and Kolodinska Brantestam, Agnese and Dubey, Mukesh and Arvidsson, Anna-Kerstin and Riesinger, Paul and Elfstrand, Malin and Karlsson, Magnus (2022). Genetic diversity of the pea root pathogen Aphanomyces euteiches in Europe. Plant Pathology. 71 :7 , 1570-1578
[Research article]

Kälin, Carol and Kolodinska Brantestam, Agnese and Arvidsson, Anna-Kerstin and Dubey, Mukesh and Elfstrand, Malin and Karlsson, Magnus (2023). Evaluation of pea genotype PI180693 partial resistance towards aphanomyces root rot in commercial pea breeding. Frontiers in Plant Science. 14 , 1114408
[Research article]

Kårén, Ola (1997). Effects of air pollution and forest regeneration methods on the community structure of ectomycorrhizal fungi. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae. Silvestria, 1401-6230 ; 33
ISBN 91-576-5317-8
[Doctoral thesis]

L

Lagerlöf, Jan and Ayuke, Fredrick Ouma and Heyman, Fredrik and Meijer, Johan (2020). Effects of biocontrol bacteria and earthworms on Aphanomyces euteiches root-rot and growth of peas (Pisum sativum) studied in a pot experiment. Acta Agriculturae Scandinavica, Section B - Soil and Plant Science. 70 , 427-436
[Research article]

Lantz, Mattias and Andersson-Sunden, Erik and Andersson, Peter and Barker, Abigail and Gustavsson, Cecilia and Hjalmarsson, Anders and Jacewicz, Marek and Lundén, Karl and Marciniewski, Pawel and Pomp, Stephan and Rathore, Vikram and Ziemann, Volker (2020). Gamma spectroscopy methodology for large amounts of environmental samples in Sweden 30 years after the Chernobyl accident. I/In: International Conference on Nuclear Data for Science and Technology (ND), MAY 19-24, 2019, Beijing, PEOPLES R CHINA.
[Conference Paper]

Larsson, Mattias and Anderson, Peter and Friberg, Hanna and Lundin, Ola (2020). Fokusprojekt Raps och avbrottsgrödor. (LTJ, LTV) > Department of Plant Protection Biology
(NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology
(NL, NJ) > Dept. of Ecology
(S) > Dept. of Ecology, Sveriges lantbruksuniversitet.
[Report]

Lazarevic, Jelena and Menkis, Audrius (2022). Cytospora friesii and Sydowia polyspora are associated with the sudden dieback of Abies concolor in Southern Europe. Plant Protection Science. 58 :3 , 258-263
[Research article]

Lazarevic, Jelena and Menkis, Audrius (2020). Fungal Diversity in the Phyllosphere of Pinus heldreichii H. Christ-An Endemic and High-Altitude Pine of the Mediterranean Region. Diversity. 12 , 172 , 1-16
[Research article]

Lazarevic, Jelena and Topalovic, Ana and Menkis, Audrius (2022). Patterns of fungal diversity in needles, rootlets and soil of endemic Pinus peuce. Baltic Forestry. 28 :1 , 58
[Research article]

Legzdina, Liva and Spungis, Voldemars and Burnevica, Natalija and Gaitnieks, Talis and Menkis, Audrius (2021). Invertebrates in Fruitbodies of Heterobasidion spp., Infected Picea abies Logs and Adjacent Soil. Forests. 12 , 1100
[Research article]

Li, Honghong and Penttinen, Petri and Juhanson, Jaanis and Stoddard, Frederick L. and Hallin, Sara and Lindström, Kristina (2022). Stable nitrogen-cycling capacity in relation to fertilization and intercropping in a sub-boreal grassland. European Journal of Soil Biology. 113 , 103441
[Research article]

Lind, Mårten (2006). Genetics of virulence and intraspecific interactions in Heterobasidion annosum s.l. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2006:102
ISBN 91-576-7251-2
[Doctoral thesis]

Lind, Mårten (2018). Parasitizing fungus Clonostachys rosea effective against parasitic nematodes in agriculture. UNSPECIFIED.

Lindahl, Björn (2001). Nutrient cycling in boreal forests : a mycological perspective : studies on phosphorus translocation within and between mycelia of saprotrophic- and mycorrhizal fungi. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae. Silvestria, 1401-6230
ISBN 91-576-6098-0
[Doctoral thesis]

Lindahl, Björn and Kyaschenko, Julia and Varenius, Kerstin and Engelbrecht Clemmensen, Karina and Dahlberg, Anders and Karltun, Erik and Stendahl, Johan (2021). A group of ectomycorrhizal fungi restricts organic matter accumulation in boreal forest. Ecology Letters. 24 , 1341-1351
[Research article]

Lindahl, Björn and Nilsson, Henrik and Tedersoo, Leho and Abarenkov, Kessy and Carlsen, Tor and Kjøller, Rasmus and Kõljalg, Urmas and Pennanen, Taina and Rosendahl, Søren and Stenlid, Jan and Kauserud, Håvard (2013). Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide. New phytologist. 199 :1 , 288-299
[Research article]

Lundin, Ola and Friberg, Hanna (2022). Odlingssystem med hållbart växtskydd. (NL, NJ) > Dept. of Ecology
(S) > Dept. of Ecology
(NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet.
[Report]

Lundén, Karl (2010). Heterobasidion - conifer pathosystem. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2010:19
ISBN 978-91-576-7496-8
[Doctoral thesis]

Lurwanu, Yahuza and Wang, Yan-Ping and Abdul, Waheed and Zhan, Jiasui and Yang, Li-Na (2020). Temperature-Mediated Plasticity Regulates the Adaptation of Phytophthora infestans to Azoxystrobin Fungicide. Sustainability. 12 , 1188 , 1-15
[Research article]

Lurwanu, Yahuza and Wang, Yan-Ping and Wu, E-Jiao and He, Dun-Chun and Waheed, Abdul and Nkurikiyimfura, Oswald and Wang, Zhen and Shang, Li-Ping and Yang, Li-Na and Zhan, Jiasui (2021). Increasing temperature elevates the variation and spatial differentiation of pesticide tolerance in a plant pathogen. Evolutionary applications. 14 , 1274-1285
[Research article]

Lynikiene, Jurate and Gedminas, Arturas and Marciulynas, Adas and Marciulyniene, Diana and Menkis, Audrius (2022). Can Larix sp. Mill. Provide Suitable Habitats for Insects and Lichens Associated with Stems of Picea abies (L.) H. Karst. in Northern Europe? Diversity. 14 :9 , 729
[Research article]

Lynikiene, Jurate and Marciulyniene, Diana and Marciulynas, Adas and Gedminas, Arturas and Vaiciukyne, Migle and Menkis, Audrius (2020). Managed and Unmanaged Pinus sylvestris Forest Stands Harbour Similar Diversity and Composition of the Phyllosphere and Soil Fungi. Microorganisms. 8 , 259 , 1-19
[Research article]

Lynikiene, Jurate and Tamutis, Vytautas and Gedminas, Arturas and Marciulynas, Adas and Menkis, Audrius (2021). First Report of the Larch Longhorn (Tetropium gabrieli Weise, Coleoptera: Cerambycidae: Spondylidinae) on Larix spp. in Lithuania. Insects. 12 , 911
[Research article]

M

Maaroufi, Nadia and De Long, Jonathan R. (2020). Global change impacts on forest soils: linkage between soil biota and carbon-nitrogen-phosphorus stoichiometry. Frontiers in forests and global change , 1-8
[Article Review/Survey]

Maaroufi, Nadia and Taylor, Astrid and Ehnes, Roswitha and Andren, Henrik and Kjellander, Petter and Björkman, Christer and Kätterer, Thomas and Klapwijk, Maartje (2022). Northward range expansion of rooting ungulates decreases detritivore and predatory mite abundances in boreal forests. Royal Society Open Science. 9 , 211283
[Research article]

Maheshwari, Arpita and Jones, Christopher and Tiemann, Maren and Hallin, Sara (2023). Carbon substrate selects for different lineages of N2O reducing communities in soils under anoxic conditions. Soil Biology and Biochemistry. 177 , 108909
[Research article]

Marciulynas, Adas and Lynikiene, Jurate and Marciulyniene, Diana and Gedminas, Arturas and Menkis, Audrius (2023). Seasonal and Site-Specific Patterns of Airborne Fungal Diversity Revealed Using Passive Spore Traps and High-Throughput DNA Sequencing. Diversity. 15 :4 , 539
[Research article]

Marciulynas, Adas and Marciulyniene, Diana and Lynikiene, Jurate and Gedminas, Arturas and Vaiciukyne, Migle and Menkis, Audrius (2020). Fungi and Oomycetes in the Irrigation Water of Forest Nurseries. Forests. 11 , 459 , 1-16
[Research article]

Marciulynas, Adas and Marciulyniene, Diana and Mishcherikova, Valeriia and Franic, Iva and Lynikiene, Jurate and Gedminas, Arturas and Menkis, Audrius (2022). High Variability of Fungal Communities Associated with the Functional Tissues and Rhizosphere Soil of Picea abies in the Southern Baltics. Forests. 13 :7 , 1103
[Research article]

Marciulyniene, Diana and Marciulynas, Adas and Lynikiene, Jurate and Vaiciukyne, Migle and Gedminas, Arturas and Menkis, Audrius (2021). DNA-Metabarcoding of Belowground Fungal Communities in Bare-Root Forest Nurseries: Focus on Different Tree Species. Microorganisms. 9 , 150
[Research article]

Marinova-Todorova, Mariela and Björklund, Niklas and Boberg, Johanna and Flø, Daniel and Tuomola, J. and Wendell, Micael and Hannunen, Salla (2020). Screening potential pests of Nordic coniferous forests associated with trade in ornamental plants. EPPO Bulletin. 50 , 249-267
[Research article]

Martin, Emily A. and Feit, Benjamin and Requier, Fabrice and Friberg, Hanna and Jonsson, Mattias (2019). Assessing the resilience of biodiversity-driven functions in agroecosystems under environmental change. Advances in Ecological Research. 60 , 59-123
[Article Review/Survey]

Martin, Gaëtan (2021). Microbial mitigation of greenhouse gas emissions from boreal lakes. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880
ISBN 978-91-7760-813-4
eISBN 978-91-7760-814-1
[Doctoral thesis]

Martin, Gaëtan and Rissanen, Antti J. and Garcia, Sarahi L. and Mehrshad, Maliheh and Buck, Moritz and Peura, Sari (2021). Candidatus Methylumidiphilus Drives Peaks in Methanotrophic Relative Abundance in Stratified Lakes and Ponds Across Northern Landscapes. Frontiers in Microbiology. 12 , 669937
[Research article]

Marupakula, Srisailam (2016). Interactions between ectomycorrhizal associations and bacteria. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2016:42
ISBN 978-91-576-8586-5
eISBN 978-91-576-8587-2
[Doctoral thesis]

Marčiulynas, Adas and Marčiulynienė, Diana and Lynikienė, Jūratė and Bakys, Remigijus and Menkis, Audrius (2022). Fungal Communities in Leaves and Roots of Healthy-Looking and Diseased Ulmus glabra. Microorganisms. 10 :11 , 2228
[Research article]

Marčiulynienė, Diana and Marciulynas, Adas and Mischerikova, Valeriia and Lynikienė, Jūratė and Gedminas, Arturas and Franic, Iva and Menkis, Audrius (2022). Principal Drivers of Fungal Communities Associated with Needles, Shoots, Roots and Adjacent Soil of Pinus sylvestris. Journal of Fungi. 8 :10 , 1112
[Research article]

Menkis, Audrius and Adas, Marčiulynas and Gedminas, Artūras and Lynikienė, Jūratė and Povilaitienė, Aistė (2015). High-throughput sequencing reveals drastic changes in fungal communities in the phyllosphere of Norway spruce (Picea abies) following invasion of the spruce bud scale (Physokermes piceae). Microbial ecology : an international journal. 70 :4 , 904-911
[Research article]

Menkis, Audrius and Bakys, Remigijus and Stein Åslund, Matilda and Davydenko, Kateryna and Elfstrand, Malin and Stenlid, Jan and Vasaitis, Rimvydas (2020). Identifying Fraxinus excelsior tolerant to ash dieback: Visual field monitoring versus a molecular marker. Forest Pathology. 50 , e12572 , 1-4
[Research article]

Menkis, Audrius and Burokiene, Daiva and Stenlid, Jan and Stenström, Elna (2016). High-Throughput Sequencing Shows High Fungal Diversity and Community Segregation in the Rhizospheres of Container-Grown Conifer Seedlings. Forests. 7 :2 , 1-15
[Research article]

Menkis, Audrius and Redr, Deanne and Bengtsson, Vikki and Hedin, Jonas and Niklasson, Mats and Nordén, Björn and Dahlberg, Anders (2022). Endophytes dominate fungal communities in six-year-old veteranisation wounds in living oak trunks. Fungal Ecology. 59 , 101020
[Research article]

Merges, Dominik and Dal Grande, Francesco and Valim, Henrique and Singh, Garima and Schmitt, Imke (2023). Gene abundance linked to climate zone: Parallel evolution of gene content along elevation gradients in lichenized fungi. Frontiers in Microbiology. 14 , 1097787
[Research article]

Meshkova, Valentyna and Borysenko, Oleksandr and Kucheryavenko, Tetiana and Skrylnyk, Yuriy and Davydenko, Kateryna and Holusa, Jaroslav (2023). Potential Westward Spread of Emerald Ash Borer, Agrilus planipennis Fairmaire, 1888 (Coleoptera: Buprestidae) from Eastern Ukraine. Forests. 14 :4 , 736
[Research article]

Mesny, Fantin and Miyauchi, Shingo and Thiergart, Thorsten and Pickel, Brigitte and Atanasova, Lea and Karlsson, Magnus and Huettel, Bruno and Barry, Kerrie W. and Bauer, Diane and Haridas, Sajeet and Chen, Cindy and Andreopoulos, William and Pangilinan, Jasmyn and LaButti, Kurt and Riley, Robert and Lipzen, Anna and Clum, Alicia and Drula, Elodie and Henrissat, Bernard and Kohler, Annegret and Grigoriev, Igor and Martin, Francis M. and Hacquard, Stephane (2021). Genetic determinants of endophytism in the Arabidopsis root mycobiome. Nature Communications. 12 , 7227
[Research article]

Mgbeahuruike, A.C. and Aliyoo, K. and Karlsson, Magnus and Chah, K.F. (2020). Identification, Antifungal Susceptibility and Phylogenetic Comparison of Fungi in Poultry Environment in Nigeria. International Journal of Poultry Science. 19 , 548-556
[Research article]

Mgbeahuruike, Anthony Christian (2009). A study of the traits associated with the biocontrol activity of Phlebiopsis gigantea. Uppsala : Sveriges lantbruksuniv.
ISBN 978-91-86197-24
[Licentiate thesis]

Mgbeahuruike, Anthony Christian and Ejiofor, Toochukwu Eleazar and Ashang, Michael Ushie and Ojiako, Chiamaka and Christian, Obasi C. and Ezema, Chuka and Okoroafor, Obianuju and Mwanza, Mulunda and Karlsson, Magnus and Chah, Kennedy F. (2021). Reduction of the Adverse Impacts of Fungal Mycotoxin on Proximate Composition of Feed and Growth Performance in Broilers by Combined Adsorbents. Toxins. 13 , 430
[Research article]

Mielke, Louis (2022). Mycorrhizal guild functions and conservational values in boreal forests. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880
ISBN 978-91-8046-022-4
eISBN 978-91-8046-023-1
[Doctoral thesis]

Mielke, Louis and Ekblad, Alf and Finlay, Roger and Fransson, Petra and Lindahl, Björn and Engelbrecht Clemmensen, Karina (2022). Ericaceous dwarf shrubs contribute a significant but drought-sensitive fraction of soil respiration in a boreal pine forest. Journal of Ecology. 110 :8 , 1928-1941
[Research article]

Millberg, Hanna (2015). Foliar fungi of Scots pine (Pinus sylvestris). Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:111
ISBN 978-91-576-8420-2
eISBN 978-91-576-8421-9
[Doctoral thesis]

Monard, Cécile and Bertilsson, Stefan and Hallin, Sara and Stenlid, Jan and Gantner, S. (2016). Habitat generalists and specialists in microbial communities across a terrestrial-freshwater gradient. Scientific Reports. 6 , 1-10
[Research article]

Montoliu-Nerin, Merce and Sanchez-Garcia, Marisol and Bergin, Claudia and Kutschera, Verena Esther and Johannesson, Hanna and Bever, James D. and Rosling, Anna (2021). In-depth Phylogenomic Analysis of Arbuscular Mycorrhizal Fungi Based on a Comprehensive Set of de novo Genome Assemblies. Frontiers in fungal biology. 2 , 716385
[Research article]

Moročko, Inga (2006). Characterization of the strawberry pathogen Gnomonia fragariae, and biocontrol possibilities. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2006:71
ISBN 91-576-7120-6
[Doctoral thesis]

Mostafanezhad, Hadis and Edin, Eva and Grenville-Briggs Didymus, Laura and Lankinen, Åsa and Liljeroth, Erland (2022). Rapid emergence of boscalid resistance in Swedish populations of Alternaria solani revealed by a combination of field and laboratory experiments. European Journal of Plant Pathology. 162 :2 , 289-303
[Research article]

Mozsik, Laszlo and Hoekzema, Mirthe and de Kok, Niels A. W. and Bovenberg, Roel A. L. and Nygard, Yvonne and Driessen, Arnold J. M. (2021). CRISPR-based transcriptional activation tool for silent genes in filamentous fungi. Scientific Reports. 11 , 1118
[Research article]

Mueller, Gregory M. and Cunha, Kelmer Martins and May, Tom W. and Allen, Jessica L. and Westrip, James R. S. and Canteiro, Catia and Costa-Rezende, Diogo Henrique and Drechsler-Santos, Elisandro Ricardo and Vasco-Palacios, Aida M. and Ainsworth, Antony Martyn and Alves-Silva, Genivaldo and Bungartz, Frank and Chandler, Amanda and Goncalves, Susana C. and Krisai-Greilhuber, Irmgard and Irsenaite, Reda and Jordal, John Bjarne and Kosmann, Thiago and Lendemer, James and McMullin, Richard Troy and Mesic, Armin and Motato-Vasquez, Viviana and Ohmura, Yoshihito and Naesborg, Rikke Reese and Perini, Claudia and Saar, Irja and Simijaca, Diego and Yahr, Rebecca and Dahlberg, Anders (2022). What Do the First 597 Global Fungal Red List Assessments Tell Us about the Threat Status of Fungi? Diversity. 14 :9 , 736
[Research article]

Mullett, Martin S. and Drenkhan, Rein and Adamson, Kalev and Boron, Piotr and Lenart-Boron, Anna and Barnes, Irene and Tomsovsky, Michal and Janosikova, Zuzana and Adamcikova, Katarina and Ondruskova, Emilia and Queloz, Valentin and Piskur, Barbara and Musolin, Dmitry L. and Davydenko, Kateryna and Georgieva, Margarita and Schmitz, Sophie and Kacergius, Audrius and Ghelardini, Luisa and Orlovic, Jelena Kranjec and Muller, Michael and Oskay, Funda and Hauptman, Tine and Halasz, Agnes and Markovskaja, Svetlana and Solheim, Halvor and Vuorinen, Martti and Heinzelmann, Renate and Hamelin, Richard C. and Konecny, Adam (2021). Worldwide Genetic Structure Elucidates the Eurasian Origin and Invasion Pathways of Dothistroma septosporum, Causal Agent of Dothistroma Needle Blight. Journal of Fungi. 7 , 111
[Research article]

Musolin, Dmitry L. and Kirichenko, Natalia I. and Karpun, Natalia N. and Aksenenko, Evgeniy V. and Golub, Viktor B. and Kerchev, Ivan A. and Mandelshtam, Michail Y. and Vasaitis, Rimvydas and Volkovitsh, Mark G. and Zhuravleva, Elena N. and Selikhovkin, Andrey V. (2022). Invasive Insect Pests of Forests and Urban Trees in Russia: Origin, Pathways, Damage, and Management. Forests. 13 :4 , 521
[Article Review/Survey]

Musolin, Dmitry L. and Selikhovkin, Andrey V. and Peregudova, Elena Y. and Popovichev, Boris G. and Mandelshtam, Michail Y. and Baranchikov, Yuri N. and Vasaitis, Rimvydas (2021). North-Westward Expansion of the Invasive Range of Emerald Ash Borer, Agrilus planipennis Fairmaire (Coleoptera: Buprestidae) towards the EU: From Moscow to Saint Petersburg. Forests. 12 , 502
[Research article]

N

Nallanchakravarthula, Srivathsa (2013). Root-associated microbial communities of different strawberry cultivars as influenced by soil type, Verticillium dahliae Kleb. and biofumigation. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2013:48
ISBN 978-91-576-7834-8
eISBN 978-91-576-7835-5
[Doctoral thesis]

Nallanchakravarthula, Srivathsa and Marupakula, Srisailam and Alström, Sadhna and Finlay, Roger and Mahmood, Shahid (2021). Changes in the root fungal microbiome of strawberry following application of residues of the biofumigant oilseed radish. Applied Soil Ecology. 168 , 104116
[Research article]

Nemesio Gorriz, Miguel (2015). Molecular responses to Heterobasidion annosum s.l. in Picea abies. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:114
ISBN 978-91-576-8426-4
eISBN 978-91-576-8427-1
[Doctoral thesis]

Neupane, Saraswoti (2013). Genomics and transcriptomics of plant beneficial Serratia spp. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2013:44
ISBN 978-91-576-7826-3
eISBN 978-91-576-7827-0
[Doctoral thesis]

Nguyen, Diem (2015). Effects of tree species diversity on foliar fungal distribution. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:130
ISBN 978-91-576-8458-5
eISBN 978-91-576-8459-2
[Doctoral thesis]

Nguyen, Diem and Boberg, Johanna and Ihrmark, Katarina and Stenström, Elna and Stenlid, Jan (2016). Do foliar fungal communities of Norway spruce shift along a tree species diversity gradient in mature European forests? Fungal Ecology. 23 , 97-108
[Research article]

Nguyen, Diem and Castagneyrol, Bastien and Bruelheide, Helge and Bussotti, Filippo and Guyot, Virginie and Jactel, Hervé and Jaroszewicz, Bogdan and Valdares, Fernando and Stenlid, Jan and Boberg, Johanna (2016). Fungal disease incidence along tree diversity gradients depends on latitude in European forests. Ecology and evolution. 6 :8 , 2426-2438
[Research article]

Nguyen, Diem and Castagneyrol, Bastien and Bruelheide, Helge and Bussotti, Filippo and Guyot, Virginie and Jactel, Hervé and Jaroszewicz, Bogdan and Valladares, Fernando and Stenlid, Jan and Boberg, Johanna (2016). Fungal disease incidence along tree diversity gradients depends on latitude in European forests. Ecology and evolution. 6 , 1-13
[Research article]

Nilsson, R. Henrik and Ryberg, Martin and Wurzbacher, Christian and Tedersoo, Leho and Anslan, Sten and Polme, Sergei and Spirin, Viacheslav and Mikryukov, Vladimir and Svantesson, Sten and Hartmann, Martin and Lennartsdotter, Charlotte and Belford, Pauline and Khomich, Maryia and Retter, Alice and Corcoll, Natalia and Martinez, Daniela Gomez and Jansson, Tobias and Vu, Duong and Sanchez-Garcia, Marisol and Kristiansson, Erik and Abarenkov, Kessy (2023). How, not if, is the question mycologists should be asking about DNA-based typification. MycoKeys :96 , 143-157
[Research article]

Niones, Jennifer T. and Sharp, Ryan T. and Donayre, Dindo King M. and Oreiro, Eula Gems and Milne, Alice E. and Oliva, Ricardo (2022). Dynamics of bacterial blight disease in resistant and susceptible rice varieties. European Journal of Plant Pathology. 163 :1 , 1-17
[Research article]

Nistrup-Jørgensen, Lise and Matzen, Niels and Ficke, Andrea and Nielsen, Ghita C. and Jalli, Marja and Ronis, Antanas and Andersson, Björn and Djurle, Annika (2020). Validation of risk models for control of leaf blotch diseases in wheat in the Nordic and Baltic countries. European Journal of Plant Pathology. 157 , 599-613
[Research article]

Njoroge, Anne (2019). Population structure and pathogenicity evolution of Phytophthora infestans affects epidemiology and management of late blight disease. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2019:14
ISBN 978-91-7760-346-7
eISBN 978-91-7760-347-4
[Doctoral thesis]

Njuguna, Jane Wangu (2011). Stem canker and dieback disease on Grevillea robusta Cunn ex R. Br. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2011:23
ISBN 978-91-576-7558-3
[Doctoral thesis]

Norberg, Lisbet and Hellman, Maria and Berglund, Kerstin and Hallin, Sara and Berglund, Örjan (2021). Methane and Nitrous oxide production from agricultural peat soils in relation to drainage level and abiotic and biotic factors. Frontiers in Environmental Science. 9 , 631112
[Research article]

Norderhaug, Ann and Engelbrecht Clemmensen, Karina and Kardol, Paul and Thorhallsdottir, Anna Gudrun and Aslaksen, Iulie (2023). Carbon sequestration potential and the multiple functions of Nordic grasslands. Climatic Change. 176 :5 , 55
[Research article]

Nordstrom, Albin and Hellman, Maria and Hallin, Sara and Herbert, Roger B. (2021). Microbial controls on net production of nitrous oxide in a denitrifying woodchip bioreactor. Journal of Environmental Quality. 50 , 228-240
[Research article]

Nwe, Thu Zar and Maaroufi, Nadia and Allan, Eric and Soliveres, Santiago and Kempel, Anne (2023). Plant attributes interact with fungal pathogens and nitrogen addition to drive soil enzymatic activities and their temporal variation. Functional Ecology. 37 :3 , 564-575
[Research article]

Nygren, Cajsa (2008). Functional diversity in nutrient acquisition by ectomycorrhizal fungi. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2008:54
ISBN 978-91-85913-87-9
[Doctoral thesis]

Nygren, Cajsa and Lindahl, Björn and Taylor, Andy (2009). Mykorrhizasvamparnas näringsupptag. Uppsala: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. Fakta. Skog ; 2008:9
[Factsheet]

O

Odilbekov, Firuz and Edin, Eva and Gustavsson, Larisa and Persson Hovmalm, Helena and Liljeroth, Erland (2016). Genetic diversity and occurrence of the F129L substitutions among isolates of Alternaria solani in south-eastern Sweden. Hereditas. 153 , 1-10
[Research article]

Ohrn, Petter and Berlin, Mats and Elfstrand, Malin and Krokene, Paal and Jonsson, Anna Maria (2021). Seasonal variation in Norway spruce response to inoculation with bark beetle-associated bluestain fungi one year after a severe drought. Forest Ecology and Management. 496 , 119443
[Research article]

Olson, Åke and Berlin, Anna and Lindgren, Anders (2019). Fokusprojekt Diagnostik, övervakning och riskhantering för framtida växtskydd. (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet.
[Report]

Olvång, Hans (1998). Havrens bladfläcksjuka. Uppsala: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. Faktablad om växtskydd. Jordbruk ; 87 J
[Factsheet]

Olvång, Hans (1998). Rotdödare i stråsäd. Uppsala: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. Faktablad om växtskydd. Jordbruk ; 93 J
[Factsheet]

Olvång, Hans (1998). Vetets bladfläcksjuka. Uppsala: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet. Faktablad om växtskydd. Jordbruk ; 90 J
[Factsheet]

Ottosson, Elisabet (2013). Succession of wood-inhabiting fungal communities. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2013:17
ISBN 978-91-576-7774-7
[Doctoral thesis]

P

Palacin-Lizarbe, Carlos and Camarero, Lluis and Hallin, Sara and Jones, Christopher and Catalan, Jordi (2020). Denitrification rates in lake sediments of mountains affected by high atmospheric nitrogen deposition. Scientific Reports. 10 , 3003 , 1-9
[Research article]

Parker, Thomas C. and Chomel, Mathilde and Engelbrecht Clemmensen, Karina and Friggens, Nina L. and Hartley, Iain P. and Johnson, David and Kater, Ilona and Krab, Eveline and Lindahl, Björn and Street, Lorna E. and Subke, Jens-Arne and Wookey, Philip A. (2022). Resistance of subarctic soil fungal and invertebrate communities to disruption of below-ground carbon supply. Journal of Ecology. 110 :12 , 2883-2897
[Research article]

Parker, Thomas C. and Engelbrecht Clemmensen, Karina and Friggens, Nina L. and Hartley, Iain P. and Johnson, David and Lindahl, Björn and Olofsson, Johan and Siewert, Matthias B. and Street, Lorna E. and Subke, Jens-Arne and Wookey, Philip A. (2020). Rhizosphere allocation by canopy-forming species dominates soil CO2 efflux in a subarctic landscape. New Phytologist. 227 , 1818-1830
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Pavlov, Igor N. and Vasaitis, Rimvydas and Litovka, Yulia A. and Stenlid, Jan and Jankovský, Libor and Timofeev, Anton A. and Menkis, Audrius (2020). Occurrence and pathogenicity of Corinectria spp. - an emerging canker disease of Abies sibirica in Central Siberia. Scientific Reports. 10 , 5597 , 1-10
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Piombo, Edoardo and Guaschino, Micol and Jensen, Dan Funck and Karlsson, Magnus and Dubey, Mukesh (2023). Insights into the ecological generalist lifestyle of Clonostachys fungi through analysis of their predicted secretomes. Frontiers in Microbiology. 14 , 1112673
[Research article]

Piombo, Edoardo and Kelbessa, Bekele Gelena and Sundararajan, Poorva and Whisson, Stephen C. and Vetukuri, Ramesh and Dubey, Mukesh (2023). RNA silencing proteins and small RNAs in oomycete plant pathogens and biocontrol agents. Frontiers in Microbiology. 14 , 1076522
[Research article]

Piombo, Edoardo and Vetukuri, Ramesh and Broberg, Anders and Kalyandurg, Pruthvi Balachandra and Kushwaha, Sandeep Kumar and Jensen, Dan Funck and Karlsson, Magnus and Dubey, Mukesh (2021). Role of Dicer-Dependent RNA Interference in Regulating Mycoparasitic Interactions. . 9 , e01099-21
[Research article]

Poretti, Manuel and Sotiropoulos, Alexandros G. and Graf, Johannes and Jung, Esther and Bourras, Salim and Krattinger, Simon G. and Wicker, Thomas (2021). Comparative Transcriptome Analysis of Wheat Lines in the Field Reveals Multiple Essential Biochemical Pathways Suppressed by Obligate Pathogens. Frontiers in Plant Science. 12 , 720462
[Research article]

Povilaitienė, Aistė and Gedminas, Arturas and Varnagirytė-Kabašinskienė, Iveta and Marčiulynienė, Diana and Marčiulynas, Adas and Lynikienė, Jūratė and Mishcherikova, Valerija and Menkis, Audrius (2022). Changes in Chemical Properties and Fungal Communities of Mineral Soil after Clear-Cutting and Reforestation of Scots Pine (Pinus sylvestris L.) Sites. Forests. 13 :11 , 1780
[Research article]

Putz, Martina (2018). Imprint of management on microbial communities in arable soil. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2018:35
ISBN 978-91-7760-210-1
eISBN 978-91-7760-211-8
[Doctoral thesis]

Pérez Izquierdo, Leticia and Clemmensen, Karina Engelbrecht and Strengbom, Joachim and Granath, Gustaf and Wardle, David A. and Nilsson, Marie-Charlotte and Lindahl, Björn (2021). Crown-fire severity is more important than ground-fire severity in determining soil fungal community development in the boreal forest. Journal of Ecology. 109 , 504-518
[Research article]

R

Rafiei, Vahideh and Najafi, Yasaman and Vélëz, Heriberto and Tzelepis, Georgios (2022). Investigating the role of a putative endolysin-like candidate effector protein in Verticillium longisporum virulence. Biochemical and Biophysical Research Communications. 629 , 6-11
[Research article]

Rafiei, Vahideh and Ruffino, Alessandra and Persson Hodén, Kristian and Törnkvist, Anna and Mozuraitis, Raimondas and Dubey, Mukesh and Tzelepis, Georgios (2021). A Verticillium longisporum pleiotropic drug transporter determines tolerance to the plant host beta-pinene monoterpene. Molecular Plant Pathology. 23 , 291-303
[Research article]

Rafiei, Vahideh and Vélëz, Heriberto and Tzelepis, Georgios (2021). The Role of Glycoside Hydrolases in Phytopathogenic Fungi and Oomycetes Virulence. International Journal of Molecular Sciences. 22 , 9359
[Article Review/Survey]

Ramesh, Vetukuri and Dubey, Mukesh and Kalyandurg, Pruthvi Balachandra and Carlsson, Anders S. and Whisson, Stephen C. and Ortiz Rios, Rodomiro Octavio (2021). Spray-induced gene silencing: an innovative strategy for plant trait improvement and disease control. Crop breeding and applied biotechnology. 21 , e387921S11
[Article Review/Survey]

Ranheim Sveen, Tord and Netherway, Tarquin and Juhanson, Jaanis and Oja, Jane and Borgström, Pernilla and Viketoft, Maria and Strengbom, Joachim and Bommarco, Riccardo and Clemmensen, Karina Engelbrecht and Hallin, Sara and Bahram, Mohammad (2021). Plant-microbe interactions in response to grassland herbivory and nitrogen eutrophication. Soil Biology and Biochemistry. 156 , 108208
[Research article]

Redondo, Miguel Angel and Berlin, Anna and Boberg, Johanna and Oliva, Jonas (2020). Vegetation type determines spore deposition within a forest–agricultural mosaic landscape. FEMS Microbiology Ecology. 96 , fiaa082 , 1-12
[Research article]

Redondo, Miguel Angel and Oliva, Jonas and Elfstrand, Malin and Boberg, Johanna and Capador-Barreto, Hernán Dario and Karlsson, Bo and Berlin, Anna (2022). Host genotype interacts with aerial spore communities and influences the needle mycobiome of Norway spruce. Environmental Microbiology. 24 :8 , 3640-3654
[Research article]

Redondo, Miguel Angel (2018). Invasion biology of forest Phytophthora species in Sweden. Diss. (sammanfattning/summary) Uppsala, Sweden : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2018:22
ISBN 978-91-7760-184-5
eISBN 978-91-7760-185-2
[Doctoral thesis]

Rissanen, Antti J. and Saarela, Taija and Jantti, Helena and Buck, Moritz and Peura, Sari and Aalto, Sanni L. and Ojala, Anne and Pumpanen, Jukka and Tiirola, Marja and Elvert, Marcus and Nykanen, Hannu (2021). Vertical stratification patterns of methanotrophs and their genetic controllers in water columns of oxygen-stratified boreal lakes. FEMS Microbiology Ecology. 97 , fiaa252
[Research article]

Roberge, Jean-Michel and Laudon, Hjalmar and Björkman, Christer and Ranius, Thomas and Sandström, Camilla and Felton, Adam and Sténs, Anna and Nordin, Annika and Granström, Anders and Widemo, Fredrik and Bergholm, Johan and Sonesson, Johan and Stenlid, Jan and Lundmark, Tomas (2016). Socio-ecological implications of modifying rotation lengths in forestry. Ambio. 45(Suppl.2) , S109-S123
[Research article]

Romdhane, Sana and Spor, Ayme and Aubert, Julie and Bru, David and Breuil, Marie-Christine and Hallin, Sara and Mounier, Arnaud and Ouadah, Sarah and Tsiknia, Myrto and Philippot, Laurent (2022). Unraveling negative biotic interactions determining soil microbial community assembly and functioning. ISME Journal. 16 , 296-306
[Research article]

Romdhane, Sana and Spor, Ayme and Banerjee, Samiran and Breuil, Marie-Christine and Bru, David and Chabbi, Abad and Hallin, Sara and van der Heijden, Marcel G. A. and Saghai, Aurélien and Philippot, Laurent (2022). Land-use intensification differentially affects bacterial, fungal and protist communities and decreases microbiome network complexity. Environmental Microbiome. 17 , 1
[Research article]

S

Saghai, Aurélien and Almén, Elin and Hallin, Sara and Glinwood, Robert (2023). Seed treatment with plant-defense elicitors decreases the abundance of ammonia oxidizers associated with winter wheat roots. Soil Biology and Biochemistry. 180 , 109016
[Research article]

Saghai, Aurélien and Banjeree, Samiran and Degrune, Florine and Edlinger, Anna and Garcia-Palacios, Pablo and Garland, Gina and Heijden, Marcel G. A. and Herzog, Chantal and Maestre, Fernando T. and Pescador, David S. and Philippot, Laurent and Rillig, Matthias C. and Romdhane, Sana and Hallin, Sara (2021). Diversity of archaea and niche preferences among putative ammonia-oxidizing Nitrososphaeria dominating across European arable soils. Environmental Microbiology. 24 :1 , 341-356
[Research article]

Saghai, Aurélien and Wittorf, Lea and Philippot, Laurent and Hallin, Sara (2022). Loss in soil microbial diversity constrains microbiome selection and alters the abundance of N-cycling guilds in barley rhizosphere. Applied Soil Ecology. 169 , 104224
[Research article]

Saghai, Aurélien and Zivanovic, Yvan and Moreira, David and Tavera, Rosaluz and Lopez-Garcia, Purificacion (2020). A Novel Microbialite-Associated Phototrophic Chloroflexi Lineage Exhibiting a Quasi-Clonal Pattern along Depth. Genome Biology and Evolution. 12 , 1207-1216
[Research article]

Sahraei, Shadi Eshghi and Cleary, Michelle and Stenlid, Jan and Brandström Durling, Mikael and Elfstrand, Malin (2020). Transcriptional responses in developing lesions of European common ash (Fraxinus excelsior) reveal genes responding to infection by Hymenoscyphus fraxineus. BMC Plant Biology. 20 , 455
[Research article]

Sahraei, Shadi Eshghi and Sanchez-Garcia, Marisol and Montoliu-Nerin, Merce and Manyara, David and Bergin, Claudia and Rosendahl, Soren and Rosling, Anna (2022). Whole genome analyses based on single, field collected spores of the arbuscular mycorrhizal fungus Funneliformis geosporum. Mycorrhiza. 32 :5 , 361-371
[Research article]

Samaras, Anastasios and Kamou, Nathalie and Tzelepis, Georgios and Karamanoli, Katerina and Menkissoglu-Spiroudi, Urania and Karaoglanidis, George S. (2022). Root Transcriptional and Metabolic Dynamics Induced by the Plant Growth Promoting Rhizobacterium (PGPR) Bacillus subtilis Mbi600 on Cucumber Plants. Plants. 11 :9 , 1218
[Research article]

Samaras, Anastasios and Karaoglanidis, George S. and Tzelepis, Georgios (2021). Insights into the multitrophic interactions between the biocontrol agent Bacillus subtilis MBI 600, the pathogen Botrytis cinerea and their plant host. Microbiological Research. 248 , 126752
[Research article]

Samils, Berit and Andersson, Björn and Edin, Eva and Elfstrand, Malin and Rönneburg, Tilman and Bucur, Diana and Hutton, Fiona and Heick, Thies M. and Hellin, Pierre and Kildea, Steven (2021). Development of a PacBio Long-Read Sequencing Assay for High Throughput Detection of Fungicide Resistance in Zymoseptoria tritici. Frontiers in Microbiology. 12 , 692845
[Research article]

Samils, Berit and Kaitera, Juha and Persson, Torgny and Stenlid, Jan and Barklund, Pia (2021). Relationship and genetic structure among autoecious and heteroecious populations of Cronartium pini in northern Fennoscandia. Fungal Ecology. 50 , 101032
[Research article]

Samils, Nicklas (2008). Monitoring the control methods of Heterobasidion annosum s.l. root rot. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2008:47
ISBN 978-91-85913-80-0
[Doctoral thesis]

Sanchez-Garcia, Marisol and Ryberg, Martin and Kalsoom Khan, Faheema and Varga, Torda and Nagy, László G. and Hibbett, David S. (2020). Fruiting body form, not nutritional mode, is the major driver of diversification in mushroom-forming fungi. Proceedings of the National Academy of Sciences. 117
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Sandgren, Mats and Dubey, Mukesh and Jensen, Dan Funck and Karlsson, Magnus and Wimal, Ubhayasekera (2012). Disruption of the Eng18B ENGase gene in the fungal biocontrol agent trichoderm atroviride affetcs growth conidation and antagonistic ability. PloS one. 7 :5 , 1-11
[Research article]

Santos-González, Juan Carlos (2007). Diversity of arbuscular mycorrhizal fungi in grasslands and arable fields. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2007:105
ISBN 978-91-85913-04-6
[Doctoral thesis]

Sanyal, Anushree and Larsson, Josefine and van Wirdum, Falkje and Andren, Thomas and Moros, Matthias and Lonn, Mikael and Andren, Elinor (2022). Not dead yet: Diatom resting spores can survive in nature for several millennia. American Journal of Botany. 109 :1 , 67-82
[Research article]

Sawakuchi, Henrique O. and Martin, Gaëtan and Peura, Sari and Bertilsson, Stefan and Karlsson, Jan and Bastviken, David (2021). Phosphorus Regulation of Methane Oxidation in Water From Ice-Covered Lakes. Journal of Geophysical Research: Biogeosciences. 126 , e2020JG006190
[Research article]

Schaefer, Luisa Katharina and Parlange, Francis and Buchmann, Gabriele and Jung, Esther and Wehrli, Andreas and Herren, Gerhard and Mueller, Marion Claudia and Stehlin, Jonas and Schmid, Roman and Wicker, Thomas and Keller, Beat and Bourras, Salim (2020). Cross-Kingdom RNAi of Pathogen Effectors Leads to Quantitative Adult Plant Resistance in Wheat. Frontiers in Plant Science. 11 , 253 , 1-13
[Research article]

Scharnweber, Kristin and Peura, Sari and Attermeyer, Katrin and Bertilsson, Stefan and Bolender, Lucas and Buck, Moritz and Einarsdottir, Karolina and Garcia, Sarahi L. and Gollnisch, Raphael and Grasset, Charlotte and Groeneveld, Marloes and Hawkes, Jeffrey A. and Lindstrom, Eva S. and Manthey, Christin and Overgaard, Robyn and Rengefors, Karin and Sedano-Nunez, Vicente T. and Tranvik, Lars J. and Székely, Anna (2021). Comprehensive analysis of chemical and biological problems associated with browning agents used in aquatic studies. Limnology and Oceanography: Methods. 19 :12 , 818-835
[Research article]

Selikhovkin, Andrey V. and Musolin, Dmitry L. and Popovichev, Boris G. and Merkuryev, Sergey A. and Volkovitsh, Mark G. and Vasaitis, Rimvydas (2022). Invasive Populations of the Emerald Ash Borer Agrilus planipennis Fairmaire, 1888 (Coleoptera: Buprestidae) in Saint Petersburg, Russia: A Hitchhiker? Insects. 13 :2 , 191
[Research article]

Shen, Lin-Lin and Waheed, Abdul and Wang, Yan-Ping and Nkurikiyimfura, Oswald and Wang, Zong-Hua and Yang, Li-Na and Zhan, Jiasui (2022). Mitochondrial Genome Contributes to the Thermal Adaptation of the Oomycete Phytophthora infestans. Frontiers in Microbiology. 13 , 928464
[Research article]

Shen, Lin-Lin and Waheed, Abdul and Wang, Yan-Ping and Nkurikiyimfura, Oswald and Wang, Zong-Hua and Yang, Li-Na and Zhan, Jiasui (2021). Multiple Mechanisms Drive the Evolutionary Adaptation of Phytophthora infestans Effector Avr1 to Host Resistance. Journal of Fungi. 7 :10 , 789
[Research article]

Sjöholm, Lina (2012). How sexual reproduction affects the population biology of Phytophthora infestans. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2012:93
ISBN 978-91-576-7740-2
[Doctoral thesis]

Skovsgaard, Jens Peter and Thomsen, Iben M. and Barklund, Pia (2009). Skötsel av bestånd med askskottsjuka. Uppsala: (NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology
(S) > Southern Swedish Forest Research Centre, Sveriges lantbruksuniversitet. Fakta. Skog ; 2009:13
[Factsheet]

Skrede, Inger and Murat, Claude and Hess, Jaqueline and Maurice, Sundy and Sonstebo, Jorn Henrik and Kohler, Annegret and Barry-Etienne, Dominique and Eastwood, Dan and Högberg, Nils and Martin, Francis and Kauserud, Havard (2021). Contrasting demographic histories revealed in two invasive populations of the dry rot fungus Serpula lacrymans. Molecular Ecology. 30 , 2772-2789
[Research article]

Smith, Monique and Vico, Giulia and Costa, Alessio and Bowles, Timothy and Gaudin, Amélie C. M. and Hallin, Sara and Watson, Christine and Alarcòn, Remedios and Berti, Antonio and Blecharczyk, Andrzej and Calderon, Francisco J. and Culman, Steven W. and Deen, William and Drury, Craig F. and Garcia y. Garcia, Axel and García-Díaz, Andrés and Hernández Plaza, Eva and Jonczyk, Krzysztof and Jäck, Ortrud and Lehman, R. Michael and Montemurro, Francesco and Morari, Francesco and Onofri, Andrea and Osborne, Shannon L. and Pasamón, José Luis Tenorio and Sandström, Boel and Santín-Montanyá, Inés and Sawinska, Zuzanna and Schmer, Marty R. and Stalenga, Jaroslaw and Strock, Jeffrey and Tei, Francesco and Topp, Cairistiona F. E. and Ventrella, Domenico and Walker, Robin L. and Bommarco, Riccardo (2023). Increasing crop rotational diversity can enhance cereal yields. Communications earth & environment. 4 :1 , 89
[Research article]

Song, Yun and Wang, Ying and Yu, Qianqian and Sun, Yueying and Zhang, Jianling and Zhan, Jiasui and Ren, Maozhi (2023). Regulatory network of GSK3-like kinases and their role in plant stress response. Frontiers in Plant Science. 14 , 1123436
[Article Review/Survey]

Sorensen, Marjorie C. and Mueller, Thomas and Donoso, Isabel and Graf, Valentin and Merges, Dominik and Vanoni, Marco and Fiedler, Wolfgang and Neuschulz, Eike Lena (2022). Scatter-hoarding birds disperse seeds to sites unfavorable for plant regeneration. Movement Ecology. 10 , 38
[Research article]

Sotiropoulos, Alexandros G. and Arango-Isaza, Epifania and Ban, Tomohiro and Barbieri, Chiara and Bourras, Salim and Cowger, Christina and Ben-David, Roi and Dinoor, Amos and Ellwood, Simon R. and Graf, Johannes and Hatta, Koichi and Helguera, Marcelo and Sanchez-Martin, Javier and McDonald, Bruce A. and Morgounov, Alexey and Muller, Marion C. and Shamanin, Vladimir and Shimizu, Kentaro K. and Yoshihira, Taiki and Zbinden, Helen and Keller, Beat and Wicker, Thomas (2022). Global genomic analyses of wheat powdery mildew reveal association of pathogen spread with historical human migration and trade. Nature Communications. 13 :1 , 4315
[Research article]

Stenberg, Johan A. and Sundh, Ingvar and Becher, Paul and Björkman, Christer and Dubey, Mukesh and Egan, Paul and Friberg, Hanna and Gil, José Fernando and Jensen, Dan Funck and Jonsson, Mattias and Karlsson, Magnus and Khalil, Sammar and Ninkovic, Velemir and Rehermann, Guillermo and Vetukuri, Ramesh and Viketoft, Maria (2021). When is it biological control? A framework of definitions, mechanisms, and classifications. Journal of Pest Science. 94 , 665-676
[Article Review/Survey]

Stenholm, Ake and Backlund, Anders and Holmström, Sara and Backlund, Maria and Hedeland, Mikael and Fransson, Petra (2021). Survival and growth of saprotrophic and mycorrhizal fungi in recalcitrant amine, amide and ammonium containing media. PLoS ONE. 16 , e0244910
[Research article]

Sterkenburg, Erica (2016). Drivers of soil fungal communities in boreal forests. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2016:24
ISBN 978-91-576-8550-6
eISBN 978-91-576-8551-3
[Doctoral thesis]

Strid, Ylva Maria Elisabeth (2012). Bark beetles facilitate the establishment of wood decay fungi. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2012:72
ISBN 978-91-576-7719-8
[Doctoral thesis]

T

Thaduri, Srinivas and Marupakula, Srisailam and Terenius, Olle and Onorati, Piero and Tellgren-Roth, Christian and Locke, Barbara and Rodrigues De Miranda, Joachim (2021). Global similarity, and some key differences, in the metagenomes of Swedish varroa-surviving and varroa-susceptible honeybees. Scientific Reports. 11 , 23214
[Research article]

Thoen, Ella and Harder, Christoffer Bugge and Kauserud, Havard and Botnen, Synnove S. and Vik, Unni and Taylor, Andy F. S. and Menkis, Audrius and Skrede, Inger (2020). In vitro evidence of root colonization suggests ecological versatility in the genus Mycena. New Phytologist. 227 , 601-612
[Research article]

Timling, Ina and Dahlberg, Anders and Walker, D. A. and Gardes, M and Charcosset, J. Y. and Welker, J. and Taylor, D. L. (2012). Distribution and drivers of ectomycorrhizal fungal communities across the North American Arctic. Ecosphere. 3 :11 , 1-25
[Research article]

Timmusk, Salme (2016). SDGs: Bridging of science and innovations with local conditions. UNSPECIFIED.

Timmusk, Salme and Abd El-Daim, Islam Ahmed Moustafa and Copolovici, Lucian and Tanilas, Triin and Kännaste, Astrid and Behers, Lawrence and Nevo, Eviatar and Seisenbaeva, Gulaim and Stenström, Elna and Niinemets, Ülo (2014). Drought-tolerance of wheat improved by rhizosphere bacteria from harsh environments. PloS one. 9 :5 , 1-13
[Research article]

Timmusk, Salme and Nevo, Eviatar (2011). Plant root associated biofilms. I/In: Bacteria in agrobiology (vol 3) : plant nutrient management. Sid./p. 1-12. Springer Verlag
[Book Chapter]

Timmusk, Salme and Nevo, Eviatar and Ayele Dadi, Fantaye and Noe, Steffen and Niinemets, Ulo (2020). Fighting Fusarium Pathogens in the Era of Climate Change: A Conceptual Approach. Pathogens. 9 , 419
[Research article]

Toljander, Jonas (2006). Interactions between soil bacteria and arbuscular mycorrhizal fungi. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2006:39
ISBN 91-576-7088-9
[Doctoral thesis]

Tzelepis, Georgios (2014). Functional differentiation of glycoside hydrolases family 18 in filamentous Ascomycetes. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2014:26
ISBN 978-91-576-8000-6
eISBN 978-91-576-8001-3
[Doctoral thesis]

Tzelepis, Georgios and Dölfors, Fredrik and Holmquist, Louise and Dixelius, Christina (2021). Plant mitochondria and chloroplasts are targeted by the Rhizoctonia solani RsCRP1 effector. Biochemical and Biophysical Research Communications. 544 , 86-90
[Research article]

U

Uwamahoro, Florence (2019). Banana xanthomonas wilt and potato bacterial wilt in Rwanda. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2019:46
ISBN 978-91-7760-410-5
eISBN 978-91-7760-411-2
[Doctoral thesis]

Uwamahoro, Florence and Bucagu, Charles and Berlin, Anna and Bylund, Helena and Yuen, Jonathan (2019). Host range and banana cultivars’ susceptibility to Xanthomonas campestris pv. musacearum in Rwanda. African Crop Science Journal. 27 , 463-478
[Research article]

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Van Poucke, Kris and Haegeman, Annelies and Goedefroit, Thomas and Focquet, Fran and Leus, Leen and Jung, Marilia Horta and Nave, Corina and Redondo, Miguel Angel and Husson, Claude and Kostov, Kaloyan and Lyubenova, Aneta and Christova, Petya and Chandelier, Anne and Slavov, Slavcho and de Cock, Arthur and Bonants, Peter and Werres, Sabine and Oliva Palau, Jonàs and Marçais, Benoit and Jung, Thomas and Stenlid, Jan and Ruttink, Tom and Heungens, Kurt (2021). Unravelling hybridization in Phytophthora using phylogenomics and genome size estimation. IMA fungus. 12 , 16
[Research article]

Varenius, Kerstin (2017). Interactions between fungi, forest management, and ecosystem services. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2017:87
ISBN 978-91-7760-064-0
eISBN 978-91-7760-065-7
[Doctoral thesis]

Varenius, Kerstin and Lindahl, Björn and Dahlberg, Anders (2017). Retention of seed trees fails to lifeboat ectomycorrhizal fungal diversity in harvested Scots pine forests. FEMS microbiology ecology. 93 :9 , 1-11
[Research article]

Viketoft, Maria and Edin, Eva and Hansson, David and Albertsson, Johannes and Svensson, Sven-Erik and Rölin, Åsa and Kvarnheden, Anders and Andersson, Björn and Liljeroth, Erland (2019). Skadegörare och växtskydd i rot- och knölgrödor. Alnarp: (LTJ, LTV) > Department of Plant Protection Biology
(LTJ, LTV) > Department of Biosystems and Technology (from 130101)
(NL, NJ) > Dept. of Ecology
(S) > Dept. of Ecology
(NL, NJ) > Dept. of Forest Mycology and Plant Pathology
(S) > Dept. of Forest Mycology and Plant Pathology, Sveriges lantbruksuniversitet.
[Report]

Viketoft, Maria and Flöhr, Adam and Englund, Jan-Eric and Kardell, Jonas and Edin, Eva (2020). Additive effect of the root-lesion nematode Pratylenchus penetransand the fungus Rhizoctonia solanion potato yield and damage. Journal of Plant Diseases and Protection. 127 , 821-829
[Research article]

Viketoft, Maria and Riggi, Laura and Bommarco, Riccardo and Hallin, Sara and Taylor, Astrid (2021). Type of organic fertilizer rather than organic amendment per se increases abundance of soil biota. PeerJ. 9 , e11204
[Research article]

Villegas, Dolors and Bartaula, Radhika and Cantero-Martinez, Carlos and Luster, Douglas and Szabo, Les and Olivera, Pablo and Berlin, Anna and Rodriguez-Algaba, Julian and Hovmoller, Mogens S. and McIntosh, Robert and Jin, Yue (2022). Barberry plays an active role as an alternate host of Puccinia graminis in Spain. Plant Pathology. 71 :5 , 1174-1184
[Research article]

Vilvert, Elisa and Olson, Åke and Wallenhammar, Ann-Charlotte and Törngren, Jonas and Berlin, Anna (2021). Scientific evidence of sustainable plant disease protection strategies for oats in Sweden: a systematic map. Environmental Evidence. 10 , 24
[Research article]

Vilvert, Elisa and Zander, Peter and Mgeni, Charles Peter and Sieber, Stefan and Lana, Marcos (2023). Assessment of Nitrogen Management on Sunflower Yield and Its Economic Response in Smallholder Farms in a Semi-Arid Region. International Journal Of Plant Production. 17 :1 , 109-119
[Research article]

Vélëz, Heriberto and Gauchan, Dhurva Prasad and Garcia Gil, Rosario (2022). Taxol and beta-tubulins from endophytic fungi isolated from the Himalayan Yew, Taxus wallichiana Zucc. Frontiers in Microbiology. 13 , 956855
[Research article]

Vélëz, Heriberto and Skytte af Sätra, Jonas and Odilbekov, Firuz and Bourras, Salim and Gustavsson, Larisa and Dalman, Kerstin (2022). Transformation and gene-disruption in the apple-pathogen, Neonectria ditissima. HEREDITAS. 159 , 31
[Research article]

van der Nest, Ariska and Wingfield, Michael J. and Sadikovic, Dusan and Mullett, Martin S. and Marcais, Benoit and Queloz, Valentin and Adamcikova, Katarina and Davydenko, Kateryna and Barnes, Irene (2023). Population structure and diversity of the needle pathogen Dothistroma pini suggests human-mediated movement in Europe. Frontiers in Genetics. 14 , 1103331
[Research article]

W

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Wallenhammar, Ann-Charlotte and Vilvert, Elisa and Bergqvist, Sanna and Olson, Åke and Berlin, Anna (2022). Scientific evidence of sustainable plant disease protection strategies for oilseed rape (Brassica napus) in Sweden: a systematic map. Environmental Evidence. 11 , 22
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Wang, Yan-Ping and Pan, Zhe-Chao and Yang, Li-Na and Burdon, Jeremy J. and Friberg, Hanna and Sui, Qi-Jun and Zhan, Jiasui (2021). Optimizing Plant Disease Management in Agricultural Ecosystems Through Rational In-Crop Diversification. Frontiers in Plant Science. 12 , 767209
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Wang, Yan-Ping and Waheed, Abdul and Liu, Shi-Ting and Li, Wen-Yang and Nkurikiyimfura, Oswald and Lurwanu, Yahuza and Wang, Zonghua and Grenville-Briggs Didymus, Laura and Yang, Lina and Zheng, Luping and Zhan, Jiasui (2021). Altitudinal Heterogeneity of UV Adaptation in Phytophthora infestans Is Associated with the Spatial Distribution of a DNA Repair Gene. Journal of Fungi. 7 , 245
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Wang, Yan-Ping and Wu, E-Jiao and Lurwanu, Yahuza and Ding, Ji-Peng and He, Dun-Chun and Waheed, Abdul and Nkurikiyimfura, Oswald and Liu, Shi-Ting and Li, Wen-Yang and Wang, Zong-Hua and Yang, Lina and Zhan, Jiasui (2021). Evidence for a synergistic effect of post-translational modifications and genomic composition of eEF-1 alpha on the adaptation of Phytophthora infestans. Ecology and Evolution. 11 , 5484-5496
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Willocquet, Laetitia and Djurle, Annika and Rossi, Vittorio and Xu, Xiangming (2022). Wheat in Western Europe. I/In: Global Plant Health Assessment. Sid./p. 34-38. International Society for Plant Pathology
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ISBN 978-91-7760-086-2
eISBN 978-91-7760-087-9
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Wittorf, Lea and Roger, Fabian and Alsterberg, Christian and Gamfeldt, Lars and Hulth, Stefan and Sundback, Kristina and Jones, Christopher and Hallin, Sara (2020). Habitat diversity and type govern potential nitrogen loss by denitrification in coastal sediments and differences in ecosystem-level diversities of disparate N2O reducing communities. FEMS Microbiology Ecology. 96 , fiaa091
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Wu, E-Jiao and Wang, Yan-Ping and Yang, Li-Na and Zhao, Mi-Zhen and Zhan, Jiasui (2022). Elevating Air Temperature May Enhance Future Epidemic Risk of the Plant Pathogen Phytophthora infestans. Journal of Fungi. 8 :8 , 808
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Zhan, Jiasui and Ericson, Lars and Gonzalez, Jose and Burdon, Jeremy J. (2022). Disease influences host population growth rates in a natural wild plant-pathogen association over a 30-year period. Journal of Ecology. 110 , 173-184
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Zhang, Ke and Kaitera, Juha and Samils, Berit and Olson, Åke (2022). Temporal and spatial dispersal of Thekopsora areolata basidiospores, aeciospores, and urediniospores. Plant Pathology. 71 :3 , 668-683
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Zhang, Ke and Olson, Åke and Samils, Berit and Kaitera, Juha (2021). Alternate host screening of Thekopsora areolata in Scandinavia: a new record on Prunus grayana. Botany. 99 , 589-600
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Zheng, Rongrong and Ma, Yanli and Liu, Luxing and Jiang, Beiying and Ke, Runmei and Guo, Sisi and He, Dunchun and Zhan, Jiasui (2022). Synergistic Improvement of Production, Economic Return and Sustainability in the Tea Industry through Ecological Pest Management. Horticulturae. 8 :12 , 1155
[Research article]

Zhu, Tingting and Li, Linxuan and Chang, Huimin and Zhan, Jiasui and Ren, Maozhi (2022). Target of Rapamycin Regulates Photosynthesis and Cell Growth in Auxenochlorella pyrenoidosa. International Journal of Molecular Sciences. 23 :19 , 11309
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Zufiaurre, Aitziber and Felip, Marisol and Camarero, Lluis and Sala-Faig, Marc and Juhanson, Jaanis and Bonilla Rosso, German and Bonilla-Rosso, German and Hallin, Sara and Catalan, Jordi (2022). Bacterioplankton seasonality in deep high-mountain lakes. Frontiers in Microbiology. 13 , 935378
[Research article]