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Items where Modified Agris Subject Categories is "(A) Swedish standard research categories 2011 > 1 Natural sciences > 106 Biological Sciences (Medical to be 3 and Agricultural to be 4) > Microbiology (Microbiology in the medical area to be 30109)"

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Number of items at this level: 193.

A

Abd El-Daim, Islam Ahmed Moustafa (2015). Use of rhizobacteria for the alleviation of plant stress. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:48
ISBN 978-91-576-8294-9
eISBN 978-91-576-8295-6
[Doctoral thesis]

Abreu, Ilka and Aksmann, Anna and Bajhaiya, Amit K. and Benlloch, Reyes and Giordano, Mario and Pokora, Wojciech and Selstam, Eva and Moritz, Thomas (2020). Changes in lipid and carotenoid metabolism in Chlamydomonas reinhardtii during induction of CO2-concentrating mechanism: Cellular response to low CO2 stress. Algal Research. 52 , 102099
[Research article]

Aleklett Kadish, Kristin and Ohlsson, Pelle and Bengtsson, Martin and Hammer, Edith C. (2021). Fungal foraging behaviour and hyphal space exploration in micro-structured Soil Chips. ISME Journal. 15 , 1782-1793
[Research article]

Alsanius, Beatrix and Gruden, Maria and Olsson, Crister (2016). Antibiotikaresistenta bakterier i bevattningsvatten: förekommer de och kan deras spridning begränsas genom fotokatalytisk behandling? Alnarp: (LTJ, LTV) > Department of Biosystems and Technology (from 130101), Sveriges lantbruksuniversitet. LTV-fakultetens faktablad ; 2016:15
[Factsheet]

Anderson, Jenna (2014). Development and evaluation of a subunit DIVA vaccine against bluetongue virus serotype 8 in cattle. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2014:48
ISBN 978-91-576-8044-0
eISBN 978-91-576-8045-7
[Doctoral thesis]

Andersson, Roger (2019). En sällsam art på alm, Seltsamia umi. Svensk mykologisk tidskrift. 40 , 7-13
[Research article]

Asari, Shashidar Yadav (2015). Studies on plant-microbe interaction to improve stress tolerance in plants for sustainable agriculture. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:76
ISBN 978-91-576-8350-2
eISBN 978-91-576-8351-9
[Doctoral thesis]

B

Bahram, Mohammad and Netherway, Tarquin and Frioux, Clémence and Ferretti, Pamela and Coelho, Luis Pedro and Geisen, Stefan and Bork, Peer and Hildebrand, Falk (2021). Metagenomic assessment of the global distribution of bacteria and fungi. Environmental Microbiology. 23 , 316-326
[Research article]

Bailet, Bonnie and Bouchez, Agnes and Franc, Alain and Frigerio, Jean-Marc and Keck, François and Karjalainen, Satu-Maaria and Rimet, Frederic and Schneider, Susanne C and Kahlert, Maria (2019). Molecular versus morphological data for benthic diatoms biomonitoring in Northern Europe freshwater and consequences for ecological status. Metabarcoding and Metagenomics. 3 , 21-35
[Research article]

Beaurepaire, Alexis and Piot, Niels and Doublet, Vincent and Antunez, Karina and Campbell, Ewan and Chantawannakul, Panuwan and Chejanovsky, Nor and Gajda, Anna and Heerman, Matthew and Panziera, Delphine and Smagghe, Guy and Yanez, Orlando and Rodrigues De Miranda, Joachim and Dalmon, Anne (2020). Diversity and Global Distribution of Viruses of the Western Honey Bee, Apis mellifera. Insects. 11 , 239 , 1-25
[Article Review/Survey]

Berglund, Örjan and Kätterer, Thomas and Meurer, Katharina (2021). Emissions of CO2, N2O and CH4 From Cultivated and Set Aside Drained Peatland in Central Sweden. Frontiers in Environmental Science. 9 , 630721
[Research article]

Beuch, Ulrike (2013). Distribution and diversity of Potato mop-top virus in Sweden. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2013:77
ISBN 978-91-576-7892-8
eISBN 978-91-576-7893-5
[Doctoral thesis]

Bjelke, Ulf and Boberg, Johanna and Oliva Palau, Jonàs and Tattersdill, Kristina and Mckie, Brendan (2016). Dieback of riparian alder caused by the Phytophthora alni complex: projected consequences for stream ecosystems. Freshwater biology. 61 :5 , 565-579
[Article Review/Survey]

Bjerketorp, Joakim and Levenfors, Jolanta and Nord, Christina and Guss, Bengt and Öberg, Bo and Broberg, Henrik (2021). Selective Isolation of Multidrug-Resistant Pedobacter spp., Producers of Novel Antibacterial Peptides. Frontiers in Microbiology. 12 , 642829
[Research article]

Blomqvist, Johanna (2011). Dekkera bruxellensis - a competitive yeast for ethanol production from conventional and non-conventional substrates. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2011:88
ISBN 978-91-576-7632-0
[Doctoral thesis]

Blumenstein, Kathrin (2015). Endophytic fungi in elms. Diss. (sammanfattning/summary) Alnarp : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:106
ISBN 978-91-576-8410-3
eISBN 978-91-576-8411-0
[Doctoral thesis]

Boqvist, Sofia and Fernström, Lise-Lotte and Alsanius, Beatrix and Lindqvist, Roland and Lindqvist, R. (2015). Escherichia coli O157:H7 reduction in hamburgers with regard to premature browning of minced beef, colour score and method for determining doneness. International journal of food microbiology. 215 , 109-116
[Research article]

Bödeker, Inga (2012). Functional ecology of ectomycorrhizal fungi. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2012:36
ISBN 978-91-576-7672-6
[Doctoral thesis]

Börjesson, Gunnar and Bolinder, Martin and Kirchmann, Holger and Kätterer, Thomas (2018). Organic carbon stocks in topsoil and subsoil in long-term ley and cereal monoculture rotations. Biology and fertility of soils. 54 , 549–558
[Research article]

Börjesson, Gunnar and Kirchmann, Holger and Kätterer, Thomas (2014). Four Swedish long-term field experiments with sewage sludge reveal a limited effect on soil microbes and on metal uptake by crops. Journal of soils and sediments (Online). 14 :1 , 164–177
[Research article]

Bösch, Yvonne and Britt, Elisabeth and Perren, Sarah and Naef, Andreas and Frey, Jurg E. and Buhlmann, Andreas (2021). Dynamics of the Apple Fruit Microbiome after Harvest and Implications for Fruit Quality. Microorganisms. 9 , 272
[Research article]

C

Caballol, Maria and Straus, Dora and Macia, Hector and Ramis, Xavier and Redondo, Miguel Angel and Oliva, Jonas (2021). Halophytophthora fluviatilis Pathogenicity and Distribution along a Mediterranean-Subalpine Gradient. Journal of Fungi. 7 , 112
[Research article]

Capo, Eric and Ninnes, Sofia and Domaizon, Isabelle and Bertilsson, Stefan and Bigler, Christian and Wang, Xiao-Ru and Bindler, Richard and Rydberg, Johan (2021). Landscape Setting Drives the Microbial Eukaryotic Community Structure in Four Swedish Mountain Lakes over the Holocene. Microorganisms. 9 , 355
[Research article]

Capo, Eric and Bravo, Andrea G. and Soerensen, Anne L. and Bertilsson, Stefan and Pinhassi, Jarone and Feng, Caiyan and Andersson, Anders F. and Buck, Moritz and Bjorn, Erik (2020). Deltaproteobacteria and Spirochaetes-Like Bacteria Are Abundant Putative Mercury Methylators in Oxygen-Deficient Water and Marine Particles in the Baltic Sea. Frontiers in Microbiology. 11 , 574080
[Research article]

Castaño Soler, Carles and Berlin, Anna and Brandström Durling, Mikael and Ihrmark, Katarina and Lindahl, Björn and Stenlid, Jan and Engelbrecht Clemmensen, Karina and Olson, Åke (2020). Optimized metabarcoding with Pacific biosciences enables semi-quantitative analysis of fungal communities. New Phytologist. 228 , 1149-1158
[Research article]

Chakraborty, Amrita and Modlinger, Roman and Ashraf, Muhammad Zubair and Synek, Jiri and Schlyter, Fredrik and Roy, Amit (2020). Core Mycobiome and Their Ecological Relevance in the Gut of Five Ips Bark Beetles (Coleoptera: Curculionidae: Scolytinae). Frontiers in Microbiology. 11 , 568853
[Research article]

Chavshin, Ali Reza and Oshaghi, Mohammad Ali and Vatandoost, Hasan and Yakhchali, Bagher and Zarenejad, Fahimeh and Terenius, Olle (2015). Malpighian tubules are important determinants of Pseudomonas transstadial transmission and longtime persistence in Anopheles stephensi. Parasites & Vectors. 8 , 1-7
[Research article]

Chea, Rortana and Nguyen-Viet, Hung and Tum, Sothyra and Unger, Fred and Boqvist, Sofia and Dang-Xuan, Sinh and Koam, Sok and Grace, Delia and Osbjer, Kristina and Heng, Theng and Sarim, Seng and Phirum, Or and Sophia, Roeurn and Lindahl, Johanna (2021). Prevalence of Salmonella spp. and Staphylococcus aureus in Chicken Meat and Pork from Cambodian Markets. Pathogens. 10 , 556
[Research article]

Cholleti, Harindranath (2018). Detection and characterisation of novel vector-borne viruses in Mozambique. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2018:42
ISBN 978-91-7760-224-8
eISBN 978-91-7760-225-5
[Doctoral thesis]

Cotes Ramal, Belén and Thoming, Gunda and Amaya Gomez, Carol Viviana and Novak, Ondrej and Nansen, Christian (2020). Root-associated entomopathogenic fungi manipulate host plants to attract herbivorous insects. Scientific Reports. 10 , 22424
[Research article]

Cowan, Graham H. and Roberts, Alison G. and Chapman, Sean and Ziegler, Angelika and Savenkov, Eugene and Torrance, Lesley (2012). The potato mop-top virus TGB2 protein and viral RNA associate with chloroplasts and viral infection induces inclusions in the plastids. Frontiers in Plant Science. 3 , 1-15
[Research article]

Cunningham, Janet L. and Bramstang, Ludvig and Singh, Abhijeet and Bannak Gedara, Shishanthi Jayarathna and Rasmusson, Annica J. and Moazzami, Ali and Müller, Bettina (2020). Impact of time and temperature on gut microbiota and SCFA composition in stool samples. PLoS ONE. 15 , e0236944 , 1-15
[Research article]

Czubatka-Bieńkowska, Anna and Kaczmarek, Joanna and Marzec-Schmidt, Katarzyna and Nieróbca, Anna and Czajka, Agnieszka and Jędryczka, Małgorzata (2020). Country-Wide qPCR Based Assessment of Plasmodiophora brassicae Spread in Agricultural Soils and Recommendations for the Cultivation of Brassicaceae Crops in Poland. Pathogens. 9 , 1070
[Research article]

D

Daniel, Geoffrey and Volc, Jindrich and Halada, Petr and Karunasekera, Hasanthi and Kim, Jong Sik (2019). Method for characterizing extracellular proteins from the cell wall proteome of the copper tolerant fungus Phialophora malorum. International Biodeterioration and Biodegradation. 144 , 104769
[Research article]

Davydenko, Kateryna and Vasaitis, Rimvydas and Menkis, Audrius (2017). Fungi associated with Ips acuminatus (Coleoptera: Curculionidae) in Ukraine with a special emphasis on pathogenicity of ophiostomatoid species. European journal of entomology. 114 , 77-85
[Research article]

Dawson, Samantha and Jönsson, Mari (2020). Just how big is intraspecific trait variation in basidiomycete fungal fruit bodies? Fungal Ecology. 46 , 100865 , 1-7
[Research article]

Dimitrova Mårtensson, Linda-Maria and Barreiro, Ana and Carlsson, Georg (2020). Markens minsta invånare i produktionsgräsmarker. (LTJ, LTV) > Department of Biosystems and Technology (from 130101), Sveriges lantbruksuniversitet. LTV-fakultetens faktablad ; 2020:7
[Factsheet]

Dimitrova Mårtensson, Linda-Maria and Barreiro, Ana and Carlsson, Georg (2020). Mykorrhiza i jorden i lågintensiv, artrik biomassproduktion. (LTJ, LTV) > Department of Biosystems and Technology (from 130101), Sveriges lantbruksuniversitet. LTV-fakultetens faktablad ; 2020:8
[Factsheet]

Doherty, Stacey Jarvis and Barbato, Robyn A. and Grandy, A. Stuart and Thomas, W. Kelley and Monteux, Sylvain and Dorrepaal, Ellen and Johansson, Margareta and Ernakovich, Jessica G. (2020). The transition from stochastic to deterministic bacterial community assembly during permafrost thaw succession. Frontiers in Microbiology. 11 , 596589
[Research article]

Dreyfuss, G and Novobilsky, Adam and Höglund, Johan and Rondelaud, D (2015). Differences in the compatibility of infection between the liver flukes Fascioloides magna and Fasciola hepatica in a Colombian population of the snail Galba sp. Journal of helminthology. 89 :6 , 720-726
[Research article]

Duguma, Dagne and Hall, Michael W. and Rugman-Jones, Paul and Stouthamer, Richard and Tereniu, Olle and Neufeld, Josh D. and Walton, William E. (2015). Developmental succession of the microbiome of Culex mosquitoes. BMC Microbiology. 15 , 1-13
[Research article]

E

Emmoth, Eva (2015). Virus inactivation - evaluation of treatment processes for food and biowaste. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:78
ISBN 978-91-576-8354-0
eISBN 978-91-576-8355-7
[Doctoral thesis]

Engel, Philipp and Rodrigues De Miranda, Joachim and Granberg, Fredrik and Hayer, Juliette and Dainat, Benjamin (2016). The bee microbiome: Impact on bee health and model for evolution and ecology of host-microbe interactions. mBIO. 7 :2 , 1-9
[Article Review/Survey]

Ertz, Damien and Guzow-Krzemińska, Beata and Thor, Göran and Łubek, Anna and Kukwa, Martin (2018). Photobiont switching causes changes in the reproduction strategy and phenotypic dimorphism in the Arthoniomycetes. Scientific Reports. 8 , 1-14
[Research article]

F

Fernandez, Leyden and Peura, Sari and Eiler, Alexander and Linz, Alexandra M. and McMahon, Katherine D. and Bertilsson, Stefan (2020). Diazotroph Genomes and Their Seasonal Dynamics in a Stratified Humic Bog Lake. Frontiers in Microbiology. 11 , 1500 , 1-16
[Research article]

Fernando, Dinesh and Thygesen, Anders and Meyer, Anne S and Daniel, Geoffrey (2019). Elucidating Field Retting Mechanisms of Hemp Fibres for Biocomposites: Effects of Microbial Actions and Interactions on the Cellular Micro-morphology and Ultrastructure of Hemp Stems and Bast Fibres. Bioresources. 14 , 4047-4084
[Research article]

Forsmark, Benjamin (2020). Impact of nitrogen deposition on carbon stocks in coniferous forest soils. Diss. (sammanfattning/summary) Umeå : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2020:2
ISBN 978-91-7760-522-5
eISBN 978-91-7760-523-2
[Doctoral thesis]

Frank, J. A. and Arntzen, M. Ø. and Sun, Li and Hagen, L. H. and McHardy, A. C. and Horn, Svein and Eijsink, Vincent G. H. and Schnürer, Anna and Pope, Phillip B. (2016). Novel syntrophic populations dominate an ammonia-tolerant methanogenic microbiome. mSystems. 1 :5 , 1-13
[Research article]

Friberg, Hanna and Persson, Paula and Jensen, Dan Funck and Bergkvist, Göran (2019). Preceding crop and tillage system affect winter survival of wheat and the fungal communities on young wheat roots and in soil. FEMS Microbiology Letters. 366 , 1-7
[Research article]

Frosth, Sara (2016). Dichelobacter nodosus and footrot in Swedish sheep. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2016:112
ISBN 978-91-576-8727-2
eISBN 978-91-576-8728-9
[Doctoral thesis]

Frosth, Sara and Karlsson Lindsjö, Oskar and Niazi, Adnan and Fernström, Lise-Lotte and Hansson, Ingrid (2020). Identification of Transmission Routes of Campylobacter and On-Farm Measures to Reduce Campylobacter in Chicken. Pathogens. 9 , 363 , 1-17
[Research article]

G

Gauchan, Dhurva Prasad and Kandel, Pratistha and Tuladhar, Astha and Acharya, Ashesh and Kadel, Upendra and Baral, Aayush and Shahi, Arjan Bir and Garcia Gil, Rosario (2020). Evaluation of antimicrobial, antioxidant and cytotoxic properties of bioactive compounds produced from endophytic fungi of Himalayan yew (Taxus wallichiana) in Nepal. F1000Research. 9 , 379
[Research article]

Gauthier, Laurent and Cornman, Robert S and Hartmann, Ulrike and Cousserans, François and Evans, Jay D and Rodrigues De Miranda, Joachim and Neumann, Peter (2015). The Apis mellifera Filamentous Virus Genome. Viruses. 7 :7 , 3798-3815
[Research article]

Gharaie, Samareh and Vaas, Lea A. I. and Rosberg, Anna Karin and Windstam, Sofia and Karlsson, Maria and Bergstrand, Karl-Johan and Khalil, Sammar and Wohanka, Walter and Alsanius, Beatrix (2017). Light spectrum modifies the utilization pattern of energy sources in Pseudomonas sp. DR 5-09. PloS one. 12 , 1-24
[Research article]

Gourlé, Hadrien (2020). A dive into the coral microbiome. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2020:29
ISBN 978-91-7760-576-8
eISBN 978-91-7760-577-5
[Doctoral thesis]

Graf, Daniel Robert Heinrich (2015). Ecology and genomics of microorganisms reducing the greenhouse gas N₂O. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:109
ISBN 978-91-576-8416-5
eISBN 978-91-576-8417-2
[Doctoral thesis]

Granberg, Fredrik and Vicente-Rubiano, Marina and Rubio-Guerri, Consuelo and Karlsson, Oskar and Kukielka, Deborah and Belak, Sandor and Sánchez-Vizcaíno, José Manuel (2013). Metagenomic Detection of Viral Pathogens in Spanish Honeybees: Co- Infection by Aphid Lethal Paralysis, Israel Acute Paralysis and Lake Sinai Viruses. PloS one. 8 :2 , 1-8
[Research article]

H

Hallin, Sara and Bodelier, Paul L. E. (2020). Grand Challenges in Terrestrial Microbiology: Moving on From a Decade of Progress in Microbial Biogeochemistry. Frontiers in Microbiology. 11 , 981 , 1-5
[Other publication in scientific journal]

Han, Biao and Zheng, Xiaoting and Baruah, Kartik and Bossier, Peter (2020). Sodium Ascorbate as a Quorum-Sensing Inhibitor Leads to Decreased Virulence in Vibrio campbellii. Frontiers in Microbiology. 11 , 1054 , 1-10
[Research article]

Hansson, Ingrid and Tamminen, Lena-Mari and Frosth, Sara and Fernström, Lise-Lotte and Emanuelson, Ulf and Boqvist, Sofia (2021). Occurrence of Campylobacter spp. in Swedish calves, common sequence types and antibiotic resistance patterns. Journal of Applied Microbiology. 130 , 2111-2122
[Research article]

Hartmann, Rahel and Mogren, Lars and Rosberg, Anna Karin and Grudén, Maria and Vågsholm, Ivar and Olsson, Crister and Fricke, A. and Stützel, H. and Alsanius, Beatrix (2017). Impact of the source of organic manure on persistence of E. coli O157:H7 gfp+ in rocket (Diplotaxis tenuifolia) and Swiss chard (Beta vulgaris cicla). Food control. 81 , 200-210
[Research article]

Hellman, Maria (2018). Microbial nitrate removal from mining waters. Uppsala : Sveriges lantbruksuniv.
ISBN 978-91-576-9589-5
eISBN 978-91-576-9590-1
[Licentiate thesis]

Henriksson, Ellinor and Söderberg, Rebecca and Ström Hallenberg, Gunilla and Kroesna, Kang and Ly, Sokong and Sear, Borin and Unger, Fred and Tum, Sothyra and Nguyen-Viet, Hung and Lindahl, Johanna (2021). Japanese Encephalitis in Small-Scale Pig Farming in Rural Cambodia: Pig Seroprevalence and Farmer Awareness. Pathogens. 10 , 578
[Research article]

Hickman, Rachel A. and Leangapichart, Thongpan and Lunha, Kamonwan and Jiwakanon, Jatesada and Angkititrakul, Sunpetch and Magnusson, Ulf and Sunde, Marianne and Jarhult, Josef D. (2021). Exploring the Antibiotic Resistance Burden in Livestock, Livestock Handlers and Their Non-Livestock Handling Contacts: A One Health Perspective. Frontiers in Microbiology. 12 , 651461
[Research article]

Holmfeldt, Karin and Nilsson, Emelie and Simone, Domenico and Lopez-Fernandez, Margarita and Wu, Xiaofen and de Bruijn, Ino and Lundin, Daniel and Andersson, Anders F. and Bertilsson, Stefan and Dopson, Mark (2021). The Fennoscandian Shield deep terrestrial virosphere suggests slow motion 'boom and burst' cycles. Communications biology. 4 , 307
[Research article]

Hossain, Shakhawat (2013). Impact of Brassicaceae cover crops on pea root rot (Aphanomyces euteiches) in subsequent peas. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2013:78
ISBN 978-91-576-7894-2
eISBN 978-91-576-7895-9
[Doctoral thesis]

Hu, Yang (2015). Understanding virulence of Heterobasidion annosum s.l., a root rot pathogen of conifers. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:118
ISBN 978-91-576-8434-9
eISBN 978-91-576-8435-6
[Doctoral thesis]

Hulting, Greta (2016). Studies of interactions with Streptococcus equi and the host. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2016:64
ISBN 978-91-576-8630-5
eISBN 978-91-576-8631-2
[Doctoral thesis]

Hurtado, Pilar and Prieto, Maria and de Bello, Francesco and Aragon, Gregorio and Lopez-Angulo, Jesus and Giordani, Paolo and Maria Diaz-Pena, Eva and Vicente, Rebeca and Merinero, Sonia and Kosuthova, Alica and Benesperi, Renato and Bianchi, Elisabetta and Mayrhofer, Helmut and Nascimbene, Juri and Grube, Martin and Wedin, Mats and Westberg, Martin and Martinez, Isabel (2020). Contrasting Environmental Drivers Determine Biodiversity Patterns in Epiphytic Lichen Communities along a European Gradient. Microorganisms. 8 , 1913
[Research article]

Huyben, David (2017). Effects of feeding yeasts on blood physiology and gut microbiota of rainbow trout. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2017:69
ISBN 978-91-7760-028-2
eISBN 978-91-7760-029-9
[Doctoral thesis]

I

Ivarsson, Emma and Grudén, Maria and Södergren, J. and Hultberg, Malin (2021). Use of faba bean (Vicia faba L.) hulls as substrate for Pleurotus ostreatus – Potential for combined mushroom and feed production. Journal of Cleaner Production. 313 , 127969
[Research article]

J

Jagadish, Anupama and Khajje, Diksha and Tony, Merinrose and Nilsson, Anna and Rodrigues De Miranda, Joachim and Terenius, Olle and Dubey, Himanshu and Mishra, Rakesh K. and Ponnuvel, Kangayam M. (2021). Development and optimization of a TaqMan assay for Nosema bombycis, causative agent of pebrine disease in Bombyx mori silkworm, based on the beta-tubulin gene. Journal of Microbiological Methods. 186 , 106238
[Research article]

Juottonen, Heli and Fontaine, Laurent and Wurzbacher, Christian and Drakare, Stina and Peura, Sari and Eiler, Alexander (2020). Archaea in boreal Swedish lakes are diverse, dominated by Woesearchaeota and follow deterministic community assembly. Environmental Microbiology. 22 , 3158-3171
[Research article]

K

Karimi, Shokoufeh (2017). Exploring probiotics-host interactions. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2017:40
ISBN 978-91-576-8853-8
eISBN 978-91-576-8854-5
[Doctoral thesis]

Karlsson, Ida (2015). Diversity of wheat phyllosphere fungi in different agricultural production systems. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:88
ISBN 978-91-576-8374-8
eISBN 978-91-576-8375-5
[Doctoral thesis]

Karlsson, Ida (2017). Ny kunskap om svampfloran på vetets blad. Växtskyddsnotiser. 71 , 4-6
[Research article]

Karlsson, Ida and Friberg, Hanna and Kolseth, Anna-Karin and Steinberg, Christian and Persson, Paula (2017). Agricultural factors affecting Fusarium communities in wheat kernels. International journal of food microbiology. 252 , 53-60
[Research article]

Karlsson, Ida and Friberg, Hanna and Kolseth, Anna-Karin and Steinberg, Christian and Persson, Paula (2017). Organic farming increases richness of fungal taxa in the wheat phyllosphere. Molecular ecology. 26 :13 , 3424-3436
[Research article]

Karlsson, Ida and Friberg, Hanna and Steinberg, Christian and Persson, Paula (2014). Fungicide effects on fungal community composition in the wheat phyllosphere. PloS one. 9 :11 , e111786
[Research article]

Karlsson Lindsjö, Oskar (2016). Metagenomic characterisation of the gastrointestinal virome of neonatal pigs. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2016:84
ISBN 978-91-576-8670-1
eISBN 978-91-576-8671-8
[Doctoral thesis]

Kibugu, James and Munga, Leonard and Mdachi, Raymond and Mburu, David and Whitaker, Thomas and Huynh, Thu P. and Grace, Delia and Lindahl, Johanna (2021). Improved Sample Selection and Preparation Methods for Sampling Plans Used to Facilitate Rapid and Reliable Estimation of Aflatoxin in Chicken Feed. Toxins. 13 , 216
[Research article]

Knight, Alan and Witzgall, Peter (2013). Combining mutualistic yeast and pathogenic virus - a novel method for codling moth control. Journal of chemical ecology. 39 :7 , 1019-1026
[Research article]

L

Lagerlöf, Jan and Adolfsson, Lena and Börjesson, Gunnar and Ehlers, Knut and Palarès Vinyoles, Glòria (2014). Land-use intensification and agroforestry in the Kenyan highland: impacts on soil microbial community composition and functional capacity. Applied soil ecology. 82 , 93-99
[Research article]

Lagerlöf, Jan and Ayuke, Fredrick and Bejai, Sarosh and Jorge, G and Lagerquist, Elsa and Meijer, Johan and Muturi, J.J. and Söderlund, Sara (2015). Potential side effects of biocontrol and plant-growth promoting Bacillus amyloliquefaciens bacteria on earthworms. Applied soil ecology. 96 , 159-164
[Research article]

Lamei, Sepideh (2018). The effect of honeybee-­specific lactic acid bacteria on american foulbrood disease of honeybees. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2018:23
ISBN 978-91-7760-186-9
eISBN 978-91-7760-187-6
[Doctoral thesis]

Lamei, Sepideh and Hu, Yue O. O. and Olofsson, Tobias and Andersson, Anders F. and Forsgren, Eva and Vasquez, Alejandra (2017). Improvement of identification methods for honeybee specific Lactic Acid Bacteria; future approaches. PloS one. 12 , 1-12
[Research article]

Lamei, Sepideh and Stephan, Jörg and Nilson, Bo and Sieuwerts, Sander and Riesbeck, Kristian and Rodrigues De Miranda, Joachim and Forsgren, Eva (2020). Feeding Honeybee Colonies with Honeybee-Specific Lactic Acid Bacteria (Hbs-LAB) Does Not Affect Colony-Level Hbs-LAB Composition or Paenibacillus larvae Spore Levels, Although American Foulbrood Affected Colonies Harbor a More Diverse Hbs-LAB Community. Microbial Ecology. 79 , 743-755
[Research article]

Lapena, David and Olsen, Pernille M. and Arntzen, Magnus O. and Kosa, Gergely and Passoth, Volkmar and Eijsink, Vincent G. H. and Horn, Svein J. (2020). Spruce sugars and poultry hydrolysate as growth medium in repeated fed-batch fermentation processes for production of yeast biomass. Bioprocess and Biosystems Engineering. 43 , 723-736
[Research article]

Leung, M. H. Y. and Tong, X. and Boifot, K. O. and Bezdan, D. and Butler, D. J. and Danko, D. C. and Gohli, J. and Green, D. C. and Hernandez, M. T. and Kelly, F. J. and Levy, S. and Mason-Buck, G. and Nieto-Caballero, M. and Syndercombe-Court, D. and Udekwu, Klas and Young, B. G. and Mason, C. E. and Dybwad, M. and Lee, P. K. H. (2021). Characterization of the public transit air microbiome and resistome reveals geographical specificity. Microbiome. 9 , 112
[Research article]

Li, Fuyong and Cheng, Christopher C. and Zheng, Jinshui and Liu, Junhong and Quevedo, Rodrigo Margain and Li, Junjie and Roos, Stefan and Ganzle, Michael G. and Walter, Jens (2021). Limosilactobacillus balticus sp. nov., Limosilactobacillus agrestis sp. nov., Limosilactobacillus albertensis sp. nov., Limosilactobacillus rudii sp. nov. and Limosilactobacillus fastidiosus sp. nov., five novel Limosilactobacillus species isolated from the vertebrate gastrointestinal tract, and proposal of six subspecies of Limosilactobacillus reuteri adapted to the gastrointestinal tract of specific vertebrate hosts. International Journal of Systematic and Evolutionary Microbiology. 71 , 004644
[Research article]

Lin, Jay (2015). Molecular characterization and prevalence of hepatitis E virus in Swedish wild animals. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:86
ISBN 978-91-576-8370-0
eISBN 978-91-576-8371-7
[Doctoral thesis]

Lindahl, Björn and Nilsson, Henrik and Tedersoo, Leho and Abarenkov, Kessy and Carlsen, Tor and Kjøller, Rasmus and Kõljalg, Urmas and Pennanen, Taina and Rosendahl, Søren and Stenlid, Jan and Kauserud, Håvard (2013). Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide. New phytologist. 199 :1 , 288-299
[Research article]

Linder, Tomas (2018). Assimilation of alternative sulfur sources in fungi. World Journal of Microbiology and Biotechnology. 34 , 1-7
[Article Review/Survey]

Linder, Tomas (2018). Development of a yeast heterologous expression cassette based on the promoter and terminator elements of the Eremothecium cymbalariae translational elongation factor 1α (EcTEF1) gene. 3 BIOTECH. 8 , 1-10
[Research article]

Linder, Tomas (2020). Nitrogen source-dependent inhibition of yeast growth by glycine and its N-methylated derivatives. Antonie van Leeuwenhoek. 113 , 437-445
[Research article]

Liu, Haoyu and Jonsson, Hans and Roos, Stefan and Ahl, David and Dicksved, Johan and Lindberg, Jan Erik and Lundh, Torbjörn (2015). Effects of Lactobacillus johnsonii and Lactobacillus reuteri on gut barrier function and heat shock proteins in intestinal porcine epithelial cells. Physiological Reports. 3 :4 , 1-13
[Research article]

Liu, Tong (2019). Biogas production from lignocellulosic agricultural residues. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2019:5
ISBN 978-91-7760-328-3
eISBN 978-91-7760-329-0
[Doctoral thesis]

Liu, Tong and Schnürer, Anna and Björkmalm, Johanna and Willquist, Karin and Kreuger, Emma (2020). Diversity and Abundance of Microbial Communities in UASB Reactors during Methane Production from Hydrolyzed Wheat Straw and Lucerne. Microorganisms. 8 , 1394
[Research article]

Lopes, Iva Guidini and Lalander, Cecilia and Vidotti, Rose Meire and Vinnerås, Björn (2020). Reduction of Bacteria in Relation to Feeding Regimes When Treating Aquaculture Waste in Fly Larvae Composting. Frontiers in Microbiology. 11 , 1616
[Research article]

Lurwanu, Yahuza and Wang, Yan-Ping and Abdul, Waheed and Zhan, Jiasui and Yang, Li-Na (2020). Temperature-Mediated Plasticity Regulates the Adaptation of Phytophthora infestans to Azoxystrobin Fungicide. Sustainability. 12 , 1188 , 1-15
[Research article]

M

Maccelli, Alessandro and Carradori, Simone and Puca, Valentina and Sisto, Francesca and Lanuti, Paola and Crestoni, Maria Elisa and Lasalvia, Alba and Muraro, Raffaella and Bysell, Helena and Di Sotto, Antonella and Roos, Stefan and Grande, Rossella (2020). Correlation between the Antimicrobial Activity and Metabolic Profiles of Cell Free Supernatants and Membrane Vesicles Produced by Lactobacillus reuteri DSM 17938. Microorganisms. 8 , 1653
[Research article]

Manzoor, Shahid and Bongcam-Rudloff, Erik and Schnürer, Anna and Müller, Bettina (2016). Genome-guided analysis and whole transcriptome profiling of the mesophilic syntrophic acetate oxidising bacterium Syntrophaceticus schinkii. PloS one. 11 :11 , 1-24
[Research article]

Manzoor, Shahid and Niazi, Adnan and Sarosh, Bejai and Meijer, Johan and Bongcam-Rudloff, Erik (2013). Genome Sequence of a Plant-Associated Bacterium, Bacillus amyloliquefaciens Strain UCMB5036. Genome announcements. 1 :2 , e00111-13
[Research article]

Maus, Irena and Wibberg, Daniel and Winkler, Anika and Pühler, Alfred and Schnürer, Anna and Schlüter, Andreas (2016). Complete genome sequence of the methanogen Methanoculleus bourgensis BA1 isolated from a biogas reactor. Genome announcements. 4 :3 , e00568-16
[Research article] (In Press)

Menkis, Audrius and Adas, Marčiulynas and Gedminas, Artūras and Lynikienė, Jūratė and Povilaitienė, Aistė (2015). High-throughput sequencing reveals drastic changes in fungal communities in the phyllosphere of Norway spruce (Picea abies) following invasion of the spruce bud scale (Physokermes piceae). Microbial ecology : an international journal. 70 :4 , 904-911
[Research article]

Menkis, Audrius and Burokiene, Daiva and Stenlid, Jan and Stenström, Elna (2016). High-Throughput Sequencing Shows High Fungal Diversity and Community Segregation in the Rhizospheres of Container-Grown Conifer Seedlings. Forests. 7 :2 , 1-15
[Research article]

Mgbeahuruike, A.C. and Aliyoo, K. and Karlsson, Magnus and Chah, K.F. (2020). Identification, Antifungal Susceptibility and Phylogenetic Comparison of Fungi in Poultry Environment in Nigeria. International Journal of Poultry Science. 19 , 548-556
[Research article]

Mgbeahuruike, Anthony Christian and Ejiofor, Toochukwu Eleazar and Ashang, Michael Ushie and Ojiako, Chiamaka and Christian, Obasi C. and Ezema, Chuka and Okoroafor, Obianuju and Mwanza, Mulunda and Karlsson, Magnus and Chah, Kennedy F. (2021). Reduction of the Adverse Impacts of Fungal Mycotoxin on Proximate Composition of Feed and Growth Performance in Broilers by Combined Adsorbents. Toxins. 13 , 430
[Research article]

Miller, Andrea (2016). The role of rodents in the transmission of Echinococcus multilocularis and other tapeworms in a low endemic area. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2016:125
ISBN 978-91-576-8753-1
eISBN 978-91-576-8754-8
[Doctoral thesis]

Moestedt, Jan (2015). Biogas production from thin stillage. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:10
ISBN 978-91-576-8218-5
eISBN 978-91-576-8219-2
[Doctoral thesis]

Mogren, Lars and Löfström, Charlotta and Alsanius, Beatrix (2017). Håll bevattningsrören rena. Alnarp: (LTJ, LTV) > Department of Biosystems and Technology (from 130101), Sveriges lantbruksuniversitet. LTV-fakultetens faktablad ; 2017:35
[Factsheet]

Monard, Cécile and Bertilsson, Stefan and Hallin, Sara and Stenlid, Jan and Gantner, S. (2016). Habitat generalists and specialists in microbial communities across a terrestrial-freshwater gradient. Scientific Reports. 6 , 1-10
[Research article]

Mondav, Rhiannon and Bertilsson, Stefan and Buck, Moritz and Langenheder, Silke and Lindstrom, Eva S. and Garcia, Sarahi L. (2020). Streamlined and Abundant Bacterioplankton Thrive in Functional Cohorts. mSystems. 5 , e00316-20
[Research article]

Motiei, Asa and Brindefalk, Björn and Ogonowski, Martin and El-Shehawy, Rehab and Pastuszek, Paulina and Ek, Karin and Liewenborg, Birgitta and Udekwu, Klas and Gorokhova, Elena (2020). Disparate effects of antibiotic-induced microbiome change and enhanced fitness in Daphnia magna. PLoS ONE. 15 :1 , 1-22
[Research article]

Motiei, Asa and Ogonowski, Martin and Reichelt, Sophia and Gorokhova, Elena (2021). Ecotoxicological assessment of suspended solids: the importance of biofilm and particle aggregation. Environmental Pollution. 280 , 116888
[Research article]

Mulaosmanovic, Emina (2021). Interactions between leaf lesions and the phyllosphere microbiota in leafy vegetables. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880
ISBN 978-91-7760-716-8
eISBN 978-91-7760-717-5
[Doctoral thesis]

Mulaosmanovic, Emina and Lindblom, Tobias and Windstam, Sofia and Bengtsson, Marie and Rosberg, Anna Karin and Mogren, Lars and Alsanius, Beatrix (2021). Processing of leafy vegetables matters: Damage and microbial community structure from field to bag. Food Control. 125 , 107894
[Research article]

Mulaosmanovic, Emina and Windstam, Sofia and Vågsholm, Ivar and Alsanius, Beatrix (2021). Size Matters: Biological and Food Safety Relevance of Leaf Damage for Colonization of Escherichia coli O157:H7 gfp+. Frontiers in Microbiology. 11 , 608086
[Research article]

N

Naguib, Mahmoud M. and Li, Ruiyun and Ling, Jiaxin and Grace, Delia and Hung, Nguyen-Viet and Lindahl, Johanna F. and Lindahl, Johanna (2021). Live and Wet Markets: Food Access versus the Risk of Disease Emergence. Trends in Microbiology. 29 , 573-581
[Article Review/Survey]

Netherway, Tarquin and Bahram, Mohammad and Krab, Eveline and Bengtsson, Jan (2021). Biotic interactions with mycorrhizal systems as extended nutrient acquisition strategies shaping forest soil communities and functions. Basic and Applied Ecology. 50 , 25-42
[Article Review/Survey]

Neupane, Saraswoti (2013). Genomics and transcriptomics of plant beneficial Serratia spp. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2013:44
ISBN 978-91-576-7826-3
eISBN 978-91-576-7827-0
[Doctoral thesis]

Nguyen, Diem and Castagneyrol, Bastien and Bruelheide, Helge and Bussotti, Filippo and Guyot, Virginie and Jactel, Hervé and Jaroszewicz, Bogdan and Valdares, Fernando and Stenlid, Jan and Boberg, Johanna (2016). Fungal disease incidence along tree diversity gradients depends on latitude in European forests. Ecology and evolution. 6 :8 , 2426-2438
[Research article]

Nguyen, Diem and Castagneyrol, Bastien and Bruelheide, Helge and Bussotti, Filippo and Guyot, Virginie and Jactel, Hervé and Jaroszewicz, Bogdan and Valladares, Fernando and Stenlid, Jan and Boberg, Johanna (2016). Fungal disease incidence along tree diversity gradients depends on latitude in European forests. Ecology and evolution. 6 , 1-13
[Research article]

Nilsson, Louise (2014). Anopheles gut microbiota provide possibilities for the development of new strategies to prevent transmission of malaria. Uppsala: (NL, NJ) > Dept. of Ecology
(S) > Dept. of Ecology
, Sveriges lantbruksuniversitet. Introductory research essay
[Report]

Nord, Christina and Levenfors, Jolanta and Bjerketorp, Joakim and Sahlberg, Christer and Guss, Bengt and Öberg, Bo and Broberg, Anders (2019). Antibacterial Isoquinoline Alkaloids from the Fungus Penicillium Spathulatum Em19. Molecules. 24 , 1-11
[Research article]

O

Ottoson, Jakob (2012). Dricksvatten och mikrobiologiska risker från lantbrukens djur. Stockholm: (VH) > Dept. of Biomedical Sciences and Veterinary Public Health, Sveriges lantbruksuniversitet.
[Report]

P

Pallin, Anton (2015). Fermentation of barley flour with Lactobacillus reuteri. Uppsala : Sveriges lantbruksuniv.
ISBN 978-91-576-9282-5
eISBN 978-91-576-9283-2
[Licentiate thesis]

Pallin, Anton (2018). Improving the functional properties of Lactobacillus reuteri. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2018:47
ISBN 978-91-7760-234-7
eISBN 978-91-7760-235-4
[Doctoral thesis]

Pimentel Sobrinho, C. and Lima Godoi, J. and Neves Souza, F. and Graco Zeppelini, C. and Espirito Santo, V. and Carvalho Santiago, D. and Sady Alves, R. and Khalil, Hussein and Carvalho Pereira, T. and Hanzen Pinna, M. and Begon, M. and Machado Cordeiro, S. and Neves Reis, J. and Costa, F. (2020). Prevalence of Diarrheagenic Escherichia coli (DEC) and Salmonella spp. with zoonotic potential in urban rats in Salvador, Brazil. Epidemiology and Infection. 149 , PII S095026882000285X
[Research article]

Putz, Martina (2018). Imprint of management on microbial communities in arable soil. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2018:35
ISBN 978-91-7760-210-1
eISBN 978-91-7760-211-8
[Doctoral thesis]

R

Ramesh, Vetukuri and Kalyandurg, Pruthvi Balachandra and Saripella, Ganapathi Varma and Sen, Diya and Gil, José Fernando and Lukhovitskaya, Nina and Grenville-Briggs Didymus, Laura and Savenkov, Eugene (2020). Effect of RNA silencing suppression activity of chrysanthemum virus B p12 protein on small RNA species. Archives of Virology. 165 , 2953-2959
[Research article]

Rocha, Elerson Matos and Marinotti, Osvaldo and Serrao, Deidre Machado and Correa, Laura Viana and Katak, Ricardo de Melo and Campos de Oliveira, Juan and Muniz, Veranilce Alves and de Oliveira, Marta Rodrigues and Ferreira, Joaquim and Pessoa, Marcos Cezar Fernandes and da Mota, Adolfo Jose and Roque, Rosemary Aparecida and Onorati, Piero and Souza-Neto, Jayme A. and Terenius, Olle and Tadei, Wanderli Pedro (2021). Culturable bacteria associated with Anopheles darlingi and their paratransgenesis potential. Malaria Journal. 20 , 40
[Research article]

Rodrigues De Miranda, Joachim and Cornman, Robert S and Evans, Jay D and Semberg, Emilia and Haddad, Nizar and Neumann, Peter and Gauthier, Laurent (2015). Genome Characterization, Prevalence and Distribution of a Macula-Like Virus from Apis mellifera and Varroa destructor. Viruses. 7 :7 , 3586-3602
[Research article]

Rodrigues De Miranda, Joachim and Forsgren, Eva (2019). Två nya forskare från honungsbigruppen vid SLU. Gadden , 6-7
[Magazine article]

Rodrigues De Miranda, Joachim and Granberg, Fredrik and Onorati, Piero and Jansson, Anna and Berggren, Åsa (2021). Virus Prospecting in Crickets-Discovery and Strain Divergence of a Novel Iflavirus in Wild and Cultivated Acheta domesticus. Viruses. 13 , 364
[Research article]

Rodrigues De Miranda, Joachim and Hedman, Harald and Onorati, Piero and Stephan, Jörg and Karlberg, Olof and Bylund, Helena and Terenius, Olle (2017). Characterization of a novel RNA virus discovered in the autumnal moth Epirrita autumnata in Sweden. Viruses. 9 :8 , 214
[Research article]

Rosberg, Anna Karin (2014). Dynamics of root microorganisms in closed hydroponic cropping systems. Diss. (sammanfattning/summary) Alnarp : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2014:51
ISBN 978-91-576-8050-1
eISBN 978-91-576-8051-8
[Doctoral thesis]

Rosberg, Anna Karin and Darlison, Julia and Mogren, Lars and Alsanius, Beatrix (2021). Commercial wash of leafy vegetables do not significantly decrease bacterial load but leads to shifts in bacterial species composition. Food Microbiology. 94 , 103667
[Research article]

Rosberg, Anna Karin and Westberg, Julia (2018). UV-ljus för rening av avloppsvatten. Alnarp: (LTJ, LTV) > Department of Biosystems and Technology (from 130101), Sveriges lantbruksuniversitet. LTV-fakultetens faktablad ; 2018:2
[Factsheet]

Rosengren, Åsa (2012). Microbiological food safety of cheese produced in Swedish small-scale dairies. Uppsala : Sveriges lantbruksuniv.
ISBN 978-91-576-9074-6
[Licentiate thesis]

Rönnberg, Elin (2014). Mast cells in bacterial infections. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2014:31
ISBN 978-91-576-8010-5
eISBN 978-91-576-8011-2
[Doctoral thesis]

Rönnberg Wästljung, Ann-Christin and Ohlsson, Jonas and Nordh, Nils-Erik and Schnürer, Anna (2020). Co-digestion of salix and manure for biogas: importance of clone choice, coppicing frequency and reactor setup. Energies. 13 , 3804 , 1-15
[Research article]

S

Safaric, Luka and Yekta, Sepehr Shakeri and Svensson, Bo H. and Schnürer, Anna and Bastviken, David and Bjorn, Annika (2020). Effect of Cobalt, Nickel, and Selenium/Tungsten Deficiency on Mesophilic Anaerobic Digestion of Chemically Defined Soluble Organic Compounds. Microorganisms. 8 , 598 , 1-18
[Research article]

Saghai, Aurélien and Zivanovic, Yvan and Moreira, David and Tavera, Rosaluz and Lopez-Garcia, Purificacion (2020). A Novel Microbialite-Associated Phototrophic Chloroflexi Lineage Exhibiting a Quasi-Clonal Pattern along Depth. Genome Biology and Evolution. 12 , 1207-1216
[Research article]

Sakaridis, Ioannis and Ellis, Richard John and Cawthraw, Shaun and Van Vliet, Arnoud H. M. and Stekel, Dov J. and Penell, Johanna and Chambers, Mark Andrew and La Ragione, Roberto M. and Cook, Alasdair J. (2018). Investigating the Association Between the Caecal Microbiomes of Broilers and Campylobacter Burden. Frontiers in Microbiology. 9 , 1-9
[Research article]

Samaras, Anastasios and Karaoglanidis, George S. and Tzelepis, Georgios (2021). Insights into the multitrophic interactions between the biocontrol agent Bacillus subtilis MBI 600, the pathogen Botrytis cinerea and their plant host. Microbiological Research. 248 , 126752
[Research article]

Sanchez-Garcia, Marisol and Ryberg, Martin and Kalsoom Khan, Faheema and Varga, Torda and Nagy, László G. and Hibbett, David S. (2020). Fruiting body form, not nutritional mode, is the major driver of diversification in mushroom-forming fungi. Proceedings of the National Academy of Sciences. 117
[Research article]

Sandgren, Mats and Dubey, Mukesh and Jensen, Dan Funck and Karlsson, Magnus and Wimal, Ubhayasekera (2012). Disruption of the Eng18B ENGase gene in the fungal biocontrol agent trichoderm atroviride affetcs growth conidation and antagonistic ability. PloS one. 7 :5 , 1-11
[Research article]

Sandgren, Mats and Karkehabadi, Saeid (2012). High resolution crystal structure of the Endo-N-acetyl-beta-D-glucosaminidase responsible for the deglycosylation of hypocrea jecorina cellulases. PloS one. 7 :7 , 1-13
[Research article]

Sannö, Axel (2018). Enteropathogenic Yersinia spp. and Salmonella spp. in Swedish wild boars. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2018:46
ISBN 978-91-7760-232-3
eISBN 978-97-7760-233-0
[Doctoral thesis]

Sanseverino,, Angela M and Bastviken, David and Sundh, Ingvar and Pickova, Jana and enrich-prast, alex (2012). Methane carbon supports aquatic food webs to the fish level. PloS one. 7 :8 , 1-8
[Research article]

Schnürer, Anna and Sun, Li and Müller, Bettina and Schnürer, Anna and Liu, Tong (2016). The microbial community structure in industrial biogas plants influences the degradation rate of straw and cellulose in batch tests. Biotechnology for biofuels. 9 , 1-20
[Research article]

Schwochow, Doreen and Serieys, Laurel E.K. and Wayne, Robert K. and Thalmann, Olaf (2012). Efficient recovery of whole blood RNA - a comparison of commercial RNA extraction protocols for high-throughput applications in wildlife species. BMC Biotechnology. 12 , 1-11
[Research article]

Segerman, Bo and Ekman, Lisa and Bagge, Elisabeth and Nyman, Ann and Persson Waller, Karin and Pringle, Märit and Segerman, Bo (2020). A shotgun metagenomic investigation of the microbiota of udder cleft dermatitis in comparison to healthy skin in dairy cows. PLoS ONE. 15 , e0242880
[Research article]

Seligsohn, Dinah (2021). Pure white gold : Subclinical mastitis in dairy camels in Kenya with a special focus on Streptococcus agalactiae. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880
ISBN 978-91-7760-758-8
eISBN 978-91-7760-759-5
[Doctoral thesis]

Shakeri Yekta, Sepehr and Liu, Tong and Mendes Anacleto, Thuane and Axelsson Bjerg, Mette and Safaric, Luka and Goux, Xavier and Karlsson, Anna and Bjorn, Annika and Schnürer, Anna (2021). Effluent solids recirculation to municipal sludge digesters enhances long-chain fatty acids degradation capacity. Biotechnology for Biofuels. 14 , 56
[Research article]

Singh, Abhijeet and Müller, Bettina and Fuxelius, Hans-Henrik and Schnürer, Anna (2019). AcetoBase: a functional gene repository and database for formyltetrahydrofolate synthetase sequences. Database. 2019 , baz142 , 1-14
[Research article]

Singh, Abhijeet and Müller, Bettina and Schnürer, Anna (2021). Profiling temporal dynamics of acetogenic communities in anaerobic digesters using next-generation sequencing and T-RFLP. Scientific Reports , 13298
[Research article]

Singh, Abhijeet and Nylander, Johan A. A. and Schnürer, Anna and Bongcam-Rudloff, Erik and Müller, Bettina (2020). High-Throughput Sequencing and Unsupervised Analysis of Formyltetrahydrofolate Synthetase (FTHFS) Gene Amplicons to Estimate Acetogenic Community Structure. Frontiers in Microbiology. 11 , 2066
[Research article]

Singh, Abhijeet and Schnürer, Anna and Westerholm, Maria (2021). Enrichment and description of novel bacteria performing syntrophic propionate oxidation at high ammonia level. Environmental Microbiology. 23 , 1620-1637
[Research article]

Skarin, Hanna (2015). Genomic organization and diversity of Clostridium botulinum group III. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:80
ISBN 978-91-576-8358-8
eISBN 978-91-576-8359-5
[Doctoral thesis]

Sormunen, Jani J. and Andersson, Tommi and Aspi, Jouni and Back, Jaana and Cederberg, Tony and Haavisto, Noora and Halonen, Hanna and Hanninen, Jari and Inkinen, Jasmin and Kulha, Niko and Laaksonen, Maija and Loehr, John and Makela, Satu and Makinen, Katja and Norkko, Joanna and Paavola, Riku and Pajala, Pauliina and Petaja, Tuukka and Puisto, Anna and Sippola, Ella and Snickars, Martin and Sundell, Janne and Tanski, Niko and Uotila, Antti and Vesilahti, Ella-Maria and Vesterinen, Eero and Vuorenmaa, Silja and Ylonen, Hannu and Klemola, Tero (2020). Monitoring of ticks and tick-borne pathogens through a nationwide research station network in Finland. Ticks and Tick-borne Diseases. 11 , 101449 , 1-10
[Research article]

Stadejek, Tomasz and Archibald, Alan L. and Bengtsson, Rebecca J. and Ait-Ali, Tahar and Wee, Bryan A. and Fitzgerald, J. Ross and Yebra, Gonzalo and Jacobson, Magdalena and Guedes, Roberto M. C. and Watson, Eleanor and Bacigalupe, Rodrigo (2020). Metagenomic sequencing of clinical samples reveals a single widespread clone of Lawsonia intracellularis responsible for porcine proliferative enteropathy. Microbial genomics. 6 , 000358 , 1-10
[Research article]

Stephan, Jörg and Lamei, Sepideh and Sepideh, Lamei and Pettis, Jeffery S. and Riesbeck, Kristian and Rodrigues De Miranda, Joachim and Forsgren, Eva (2019). Honeybee-Specific Lactic Acid Bacterium Supplements Have No Effect on American Foulbrood-Infected Honeybee Colonies. Applied and Environmental Microbiology. 85 , 1-14
[Research article]

Sterkenburg, Erica (2016). Drivers of soil fungal communities in boreal forests. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2016:24
ISBN 978-91-576-8550-6
eISBN 978-91-576-8551-3
[Doctoral thesis]

Sun, Li (2015). Biogas production from lignocellulosic materials. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:83
ISBN 978-91-576-8364-9
eISBN 978-91-576-8365-6
[Doctoral thesis]

Sun, Li and Bernes, Gun and Dicksved, Johan and Höjer, Annika and Hallin Saedén, Karin and Johansson, Monika and Hetta, Mårten and Lundh, Åse (2018). Impact of farm management on microflora of raw bovine milk: a Swedish farm based study. I/In: The 2018 American Dairy Science Association, Annual Meeting, Knoxville, Tennessee, June 24-27, 2018.
[Conference Paper]

Sun, Li and Schnürer, Anna (2016). Draft Genome Sequence of the Cellulolytic Strain Clostridium sp. Bc-iso-3 Isolated from an Industrial-Scale Anaerobic Digester. Genome announcements. 4 :5 , 1-2
[Research article]

Sundh, Ingvar and Eilenberg, Jorgen (2021). Why has the authorization of microbial biological control agents been slower in the EU than in comparable jurisdictions? Pest Management Science. 77 , 2170-2178
[Research article]

Svanström, Åsa (2013). Trehalose metabolism and stress resistance in Aspergillus niger. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2013:74
ISBN 978-91-576-7886-7
eISBN 978-91-576-7887-4
[Doctoral thesis]

Svartström, Olov (2014). Treponema spp. in necrotic skin ulcers in pigs. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2014:38
ISBN 978-91-576-8024-2
eISBN 978-91-576-8025-9
[Doctoral thesis]

Söderlund, Robert (2015). Molecular epidemiology of verotoxigenic Escherichia coli O157:H7. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2015:110
ISBN 978-91-576-8418-9
eISBN 978-91-576-8419-6
[Doctoral thesis]

T

Thompson, Helen O. and Önning, G. and Holmgren, K. and Strandler, H. S. and Hultberg, Malin (2020). Fermentation of Cauliflower and White Beans with Lactobacillus plantarum - Impact on Levels of Riboflavin, Folate, Vitamin B-12, and Amino Acid Composition. Plant Foods for Human Nutrition. 75 , 236-242
[Research article]

Timling, Ina and Dahlberg, Anders and Walker, D. A. and Gardes, M and Charcosset, J. Y. and Welker, J. and Taylor, D. L. (2012). Distribution and drivers of ectomycorrhizal fungal communities across the North American Arctic. Ecosphere. 3 :11 , 1-25
[Research article]

Timmusk, Salme and Abd El-Daim, Islam Ahmed Moustafa and Copolovici, Lucian and Tanilas, Triin and Kännaste, Astrid and Behers, Lawrence and Nevo, Eviatar and Seisenbaeva, Gulaim and Stenström, Elna and Niinemets, Ülo (2014). Drought-tolerance of wheat improved by rhizosphere bacteria from harsh environments. PloS one. 9 :5 , 1-13
[Research article]

Timmusk, Salme and Nevo, Eviatar and Ayele Dadi, Fantaye and Noe, Steffen and Niinemets, Ulo (2020). Fighting Fusarium Pathogens in the Era of Climate Change: A Conceptual Approach. Pathogens. 9 , 419
[Research article]

Tiukova, Ievgeniia (2014). Dekkera bruxellensis, a non-conventional ethanol production yeast. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2014:40
ISBN 978-91-576-8028-0
eISBN 978-91-576-8029-7
[Doctoral thesis]

Tzelepis, Georgios (2014). Functional differentiation of glycoside hydrolases family 18 in filamentous Ascomycetes. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2014:26
ISBN 978-91-576-8000-6
eISBN 978-91-576-8001-3
[Doctoral thesis]

V

Vortmann, Marina and Stumpf, Anna K. and Sgobba, Elvira and Dirks-Hofmeister, Mareike E. and Krehenbrink, Martin and Wendisch, Volker F. and Philipp, Bodo and Moerschbacher, Bruno M. (2021). A bottom-up approach towards a bacterial consortium for the biotechnological conversion of chitin to L-lysine. Applied Microbiology and Biotechnology. 105 , 1547-1561
[Research article]

W

Waheed, Abdul and Wang, Yan-Ping and Nkurikiyimfura, Oswald and Li, Wen-Yang and Liu, Shi-Ting and Lurwanu, Yahuza and Lu, Guo-Dong and Wang, Zong-Hua and Yang, Li-Na and Zhan, Jiasui (2021). Effector Avr4 in Phytophthora infestans Escapes Host Immunity Mainly Through Early Termination. Frontiers in Microbiology. 12 , 646062
[Research article]

Wang, Baolin (2020). Mercury methylation in boreal peatlands: Influence of geochemistry and biology. Diss. (sammanfattning/summary) Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2020:31
ISBN 978-91-7760-580-5
eISBN 978-91-7760-581-2
[Doctoral thesis]

Wang, Yan-Ping and Waheed, Abdul and Liu, Shi-Ting and Li, Wen-Yang and Nkurikiyimfura, Oswald and Lurwanu, Yahuza and Wang, Zonghua and Grenville-Briggs Didymus, Laura and Yang, Lina and Zheng, Luping and Zhan, Jiasui (2021). Altitudinal Heterogeneity of UV Adaptation in Phytophthora infestans Is Associated with the Spatial Distribution of a DNA Repair Gene. Journal of Fungi. 7 , 245
[Research article]

Wessén, Ella (2011). Niche differentiation of ammonia oxidizing bacteria and archaea in managed soils. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2011:25
ISBN 978-91-576-7560-6
[Doctoral thesis]

Westerholm, Maria and Castillo, M.d.P. and Chan Andersson, A. and Jahre Nilsen, P. and Schnürer, Anna (2019). Effects of thermal hydrolytic pre-treatment on biogas process efficiency and microbial community structure in industrial- and laboratory-scale digesters. Waste Management. 95 , 150-160
[Research article]

Westerholm, Maria and Moestedt, Jan and Schnürer, Anna (2016). Biogas production through syntrophic acetate oxidation and deliberate operating strategies for improved digester performance. Applied energy : an international journal. 179 , 124-135
[Research article]

Westerholm, Maria and Schnürer, Anna (2019). Microbial Responses to Different Operating Practices for Biogas Production Systems. I/In: Anaerobic Digestion. Sid./p. 1-36. InTech
ISBN 978-1-83881-849-4
[Book Chapter]

Wittorf, Lea (2017). Denitrifying and nitrous oxide reducing genotypes. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2017:98
ISBN 978-91-7760-086-2
eISBN 978-91-7760-087-9
[Doctoral thesis]

Wittorf, Lea and Roger, Fabian and Alsterberg, Christian and Gamfeldt, Lars and Hulth, Stefan and Sundback, Kristina and Jones, Christopher and Hallin, Sara (2020). Habitat diversity and type govern potential nitrogen loss by denitrification in coastal sediments and differences in ecosystem-level diversities of disparate N2O reducing communities. FEMS Microbiology Ecology. 96 , fiaa091
[Research article]

X

Xiong, Wu and Jousset, Alexandre and Li, Rong and Delgado-Baquerizo, Manuel and Bahram, Mohammad and Logares, Ramiro and Wilden, Benjamin and de Groot, Gerard Arjen and Amacker, Nathalie and Kowalchuk, George A. and Shen, Qirong and Geisen, Stefan (2021). A global overview of the trophic structure within microbiomes across ecosystems. Environment International. 151 , 106438
[Research article]

Xu, Jingying and Liem-Nguyen, Van and Buck, Moritz and Bertilsson, Stefan and Bjorn, Erik and Bravo, Andrea G. (2021). Mercury Methylating Microbial Community Structure in Boreal Wetlands Explained by Local Physicochemical Conditions. Frontiers in Environmental Science. 8 , 518662
[Research article]

Y

Yanez, Orlando and Chavez-Galarza, Julio and Tellgren-Roth, Christian and Pinto, M. Alice and Neumann, Peter and Rodrigues De Miranda, Joachim (2020). The honeybee (Apis mellifera) developmental state shapes the genetic composition of the deformed wing virus-A quasispecies during serial transmission. Scientific Reports. 10 , 5956
[Research article]

Yanez, Orlando and Piot, Niels and Dalmon, Anne and Rodrigues De Miranda, Joachim and Chantawannakul, Panuwan and Panziera, Delphine and Amiri, Esmaeil and Smagghe, Guy and Schroeder, Declan and Chejanovsky, Nor (2020). Bee Viruses: Routes of Infection in Hymenoptera. Frontiers in Microbiology. 11 , 943 , 1-22
[Article Review/Survey]

Å

Ågren, Joakim (2014). Using genomics to improve Bacillus anthracis diagnostics and outbreak investigations. Diss. (sammanfattning/summary) Uppsala : Sveriges lantbruksuniv., Acta Universitatis Agriculturae Sueciae, 1652-6880 ; 2014:60
ISBN 978-91-576-8068-6
eISBN 978-91-576-8069-3
[Doctoral thesis]

This list was generated on Mon Aug 2 18:34:44 2021 CEST.